RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 TRIM14Q14142 442 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 DBN1Q16643 649 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 SLC5A12Q1EHB4 618 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ANKRD20A2Q5SQ80 823 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ANKRD20A1Q5TYW2 823 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ANKRD20A3Q5VUR7 823 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 PRAMEF13Q5VWM6 474 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ZNF449Q6P9G9 518 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 COX15Q7KZN9 410 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 OVCH1Q7RTY7 1134 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 TBC1D21Q8IYX1 336 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ACTL9Q8TC94 416 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 FAR1Q8WVX9 515 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 KRT35Q92764 455 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 MARVELD3Q96A59 401 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 FKBP10Q96AY3 582 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 SPSB2Q99619 263 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 HEMGNQ9BXL5 484 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 FEZ2Q9UHY8 353 aaPredicted RBP9.59□□□□□ -0.87
LIG1-209ENST00000596104 PLCL2Q9UPR0 1127 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 OSGIN2Q9Y236 505 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 ASF1AQ9Y294 204 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 HS3ST3B1Q9Y662 390 aa9.59□□□□□ -0.87
LIG1-209ENST00000596104 OTOGQ6ZRI0 2925 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 A0A1B0GX78 115 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 SLC5A10A0PJK1 596 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 ARHGAP10A1A4S6 786 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 BHMG1C9JSJ3 638 aaPredicted RBP9.58□□□□□ -0.88
LIG1-209ENST00000596104 MFAP3LO75121 409 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 AP2A1O95782 977 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 ALBP02768 609 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 STSP08842 583 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 EDN3P14138 238 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PSMA3P25788 255 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PER3P56645 1201 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 OTUD4Q01804 1114 aaKnown RBP9.58□□□□□ -0.88
LIG1-209ENST00000596104 SPARCL1Q14515 664 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PRPSAP1Q14558 356 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 KIR2DS3Q14952 304 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 NKG7Q16617 165 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 AGAP7PQ5VUJ5 663 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 B3GNTL1Q67FW5 361 aaPredicted RBP9.58□□□□□ -0.88
LIG1-209ENST00000596104 KCTD11Q693B1 232 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 KIRREL2Q6UWL6 708 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 CCDC50Q8IVM0 306 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 FAM20CQ8IXL6 584 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 OR5K2Q8NHB8 316 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 DNAJB14Q8TBM8 379 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 CCDC110Q8TBZ0 833 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 COG1Q8WTW3 980 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 SPATA13Q96N96 652 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 AGAP4Q96P64 663 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 SLX1AQ9BQ83 275 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 TBL1YQ9BQ87 522 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 ANP32EQ9BTT0 268 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 UNKQ9C0B0 810 aaKnown RBP9.58□□□□□ -0.88
LIG1-209ENST00000596104 SLC26A1Q9H2B4 701 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 WDR54Q9H977 334 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 NLE1Q9NVX2 485 aaPredicted RBP9.58□□□□□ -0.88
LIG1-209ENST00000596104 EURLQ9NYK6 297 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 POLG2Q9UHN1 485 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PLAGL1Q9UM63 463 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PRSS21Q9Y6M0 314 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 CSMD1Q96PZ7 3565 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 FER1L5A0AVI2 2057 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 PIKFYVEQ9Y2I7 2098 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 CROCCQ5TZA2 2017 aa9.58□□□□□ -0.88
LIG1-209ENST00000596104 CCDC78A2IDD5 438 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ISM1B1AKI9 464 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 KCNN4O15554 427 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 PJA2O43164 708 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TPM3P06753 285 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 RBP3P10745 1247 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 MAGP20916 626 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ALAS2P22557 587 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 PKLRP30613 574 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 NSG1P42857 185 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ARSFP54793 590 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 CACNG1Q06432 222 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 Q0VFX4 171 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 CDC16Q13042 620 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ITIH4Q14624 930 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ZNF169Q14929 603 aaPredicted RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 BRD3Q15059 726 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TLR1Q15399 786 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 SP5Q6BEB4 398 aaPredicted RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 PACS1Q6VY07 963 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 NAPRTQ6XQN6 538 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TTLL10Q6ZVT0 673 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TAS2R42Q7RTR8 314 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 MCATQ8IVS2 390 aaKnown RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 CDKL3Q8IVW4 592 aaPredicted RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 LINC01555Q8NAE3 123 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.57□□□□□ -0.88
LIG1-209ENST00000596104 ELMO1Q92556 727 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 DLG3Q92796 817 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 CDKN2AIPNLQ96HQ2 116 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 ZNF285Q96NJ3 590 aa9.57□□□□□ -0.88
LIG1-209ENST00000596104 TRIM56Q9BRZ2 755 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms