RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ANKRD34CP0C6C1 535 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 JMJD7P0C870 316 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 MYBL2P10244 700 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 HGFP14210 728 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 MAP4P27816 1152 aaKnown RBP13.91□□□□□ -0.18
LIG1-208ENST00000595758 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
LIG1-208ENST00000595758 ZNF460Q14592 562 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 UAP1Q16222 522 aaPredicted RBP13.91□□□□□ -0.18
LIG1-208ENST00000595758 UBE2R2Q712K3 238 aaPredicted RBP13.91□□□□□ -0.18
LIG1-208ENST00000595758 PRSS42Q7Z5A4 293 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 RASGRP3Q8IV61 690 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 CEP97Q8IW35 865 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 OR9A1PQ8NGU1 263 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 IL17FQ96PD4 163 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 MAP3K3Q99759 626 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 RAB11FIP5Q9BXF6 653 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 TXLNGYQ9BZA5 131 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 CAB39LQ9H9S4 337 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 POPDC3Q9HBV1 291 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 SYTL2Q9HCH5 934 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 ACTR10Q9NZ32 417 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.91□□□□□ -0.18
LIG1-208ENST00000595758 LNPEPQ9UIQ6 1025 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 POMT2Q9UKY4 750 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 PCDHGA8Q9Y5G5 932 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 V9GYY5 206 aaPredicted RBP13.91□□□□□ -0.18
LIG1-208ENST00000595758 KIF26BQ2KJY2 2108 aa13.91□□□□□ -0.18
LIG1-208ENST00000595758 TLCD2A6NGC4 264 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 MYO1CO00159 1063 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 RIPK2O43353 540 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 C8GP07360 202 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 ITGA2BP08514 1039 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 ABHD2P08910 425 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 STMN1P16949 149 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 RBMS1P29558 406 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 PRDX3P30048 256 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 SEPHS1P49903 392 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 CYP4F3Q08477 520 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 KIR2DS3Q14952 304 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 TMEM207Q6UWW9 146 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 LSMEM2Q8N112 164 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 CARFQ8N187 725 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 NKAPQ8N5F7 415 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 C2orf73Q8N5S3 287 aaPredicted RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 FBXO15Q8NCQ5 510 aaPredicted RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 OR2L8Q8NGY9 312 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 MCOLN3Q8TDD5 553 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 KLHL6Q8WZ60 621 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 PDLIM5Q96HC4 596 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 PKP4Q99569 1192 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 TMEM121BQ9BXQ6 578 aaPredicted RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 ZNF768Q9H5H4 540 aaKnown RBP13.9□□□□□ -0.18
LIG1-208ENST00000595758 GPAMQ9HCL2 828 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 SPHK1Q9NYA1 384 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 SPATA7Q9P0W8 599 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 SEMA5BQ9P283 1151 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 PISDQ9UG56 409 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 IKBKGQ9Y6K9 419 aa13.9□□□□□ -0.18
LIG1-208ENST00000595758 IGHV5-51A0A0C4DH38 117 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 EFCAB7A8K855 629 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 ISM1B1AKI9 464 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 POC1B-GALNT4F8VUJ3 575 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SLC16A5O15375 505 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 PHGDHO43175 533 aaKnown RBP13.89□□□□□ -0.19
LIG1-208ENST00000595758 BRINP1O60477 761 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 TNFSF15O95150 251 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SYF2O95926 243 aaKnown RBP13.89□□□□□ -0.19
LIG1-208ENST00000595758 INHBAP08476 426 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 CCL4P13236 92 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 CYP2A7P20853 494 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 CDH3P22223 829 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 HSD17B2P37059 387 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 MSH2P43246 934 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 ARL4DP49703 201 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 RAB10P61026 200 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 VSNL1P62760 191 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SP140Q13342 867 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 CYP2A13Q16696 494 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 ERCC6LQ2NKX8 1250 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 MROH9Q5TGP6 573 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 ANKS6Q68DC2 871 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SPESP1Q6UW49 350 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 UNQ6494/PRO21346Q6UXR6 183 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 FAM129CQ86XR2 697 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 LMNTD1Q8N9Z9 388 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 LINC01555Q8NAE3 123 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 DENND1AQ8TEH3 1009 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SLC44A1Q8WWI5 657 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 PRR11Q96HE9 360 aaPredicted RBP13.89□□□□□ -0.19
LIG1-208ENST00000595758 PPM1MQ96MI6 270 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SLC46A1Q96NT5 459 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 OR2A14Q96R47 310 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 SLC12A9Q9BXP2 914 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 CCDC86Q9H6F5 360 aaKnown RBP13.89□□□□□ -0.19
LIG1-208ENST00000595758 PARVBQ9HBI1 364 aa13.89□□□□□ -0.19
LIG1-208ENST00000595758 C1GALT1Q9NS00 363 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms