RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 FBXO22Q8NEZ5 403 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 PJA1Q8NG27 643 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 BCL7CQ8WUZ0 217 aaPredicted RBP16.14■□□□□ 0.17
LIG1-206ENST00000594067 ZNF641Q96N77 438 aaPredicted RBP16.14■□□□□ 0.17
LIG1-206ENST00000594067 OR52E6Q96RD3 313 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 TTPALQ9BTX7 342 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 CD244Q9BZW8 370 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 LRTM1Q9HBL6 345 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 MAGEE1Q9HCI5 957 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 GIN1Q9NXP7 522 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 PCDHB7Q9Y5E2 793 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 U3KQV3 271 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 HTTP42858 3142 aa16.14■□□□□ 0.17
LIG1-206ENST00000594067 H7C4K7 107 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 SLC28A1O00337 649 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 GAPDHSO14556 408 aaPredicted RBP16.13■□□□□ 0.17
LIG1-206ENST00000594067 MSH3P20585 1137 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 CST5P28325 142 aaPredicted RBP16.13■□□□□ 0.17
LIG1-206ENST00000594067 IFITM3Q01628 133 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 OCA2Q04671 838 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 PON2Q15165 354 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 RUNDC3AQ59EK9 446 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 PERM1Q5SV97 790 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 CACHD1Q5VU97 1274 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 CERS6Q6ZMG9 384 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 C10orf111Q8N326 155 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 PAF1Q8N7H5 531 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 FRS2Q8WU20 508 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 HMG20AQ9NP66 347 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 A8MX80 341 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 ARVCFO00192 962 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 TBL1XO60907 577 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 ITIH1P19827 911 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 ARMC12Q5T9G4 340 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 MICU2Q8IYU8 434 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 CADM3Q8N126 398 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 MYO19Q96H55 970 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 CWH43Q9H720 699 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 PAK1IP1Q9NWT1 392 aaPredicted RBP16.13■□□□□ 0.17
LIG1-206ENST00000594067 MTRRQ9UBK8 725 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 NAALAD2Q9Y3Q0 740 aa16.13■□□□□ 0.17
LIG1-206ENST00000594067 FAM32AQ9Y421 112 aaKnown RBP16.13■□□□□ 0.17
LIG1-206ENST00000594067 C2orf78A6NCI8 922 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 E2F6O75461 281 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 GSNP06396 782 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 DGKAP23743 735 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 GKP32189 559 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ISL1P61371 349 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 SMARCB1Q12824 385 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 MAD2L1Q13257 205 aaPredicted RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 SNX29P2Q8IUI4 249 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 RBFAQ8N0V3 343 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 PIH1D2Q8WWB5 315 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ULK4Q96C45 1275 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 RHBDF1Q96CC6 855 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 VMP1Q96GC9 406 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 RBM4BQ9BQ04 359 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 RBM4Q9BWF3 364 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 CLMPQ9H6B4 373 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 KIAA1522Q9P206 1035 aaPredicted RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 DNMT3BQ9UBC3 853 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 PTGES3LE9PB15 166 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 MANBAO00462 879 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 TOR1BO14657 336 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 AREL1O15033 823 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 AQP9O43315 295 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 CNOT3O75175 753 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 CREG1O75629 220 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 SCELO95171 688 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 SERPINA1P01009 418 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 IL6P05231 212 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 OR1D2P34982 312 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 CAP1Q01518 475 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 EPS8Q12929 822 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 RGMBQ6NW40 437 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 SVOPLQ8N434 492 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ZBTB2Q8N680 514 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 NETO1Q8TDF5 533 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ZFP90Q8TF47 636 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 C2orf15Q8WU43 125 aaKnown RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 ERLEC1Q96DZ1 483 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 NODALQ96S42 347 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ZFYVE1Q9HBF4 777 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ITGB1BP2Q9UKP3 347 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 PCDHB14Q9Y5E9 798 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 LOC100130705A0A1B0GUX0 176 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 NDUFS2O75306 463 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 CLDN7O95471 211 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 B3GALT4O96024 378 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 GALTP07902 379 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 PFKLP17858 780 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 DCTP40126 519 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 PHC1P78364 1004 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 VAC14Q08AM6 782 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 NFATC2Q13469 925 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 ARHGEF7Q14155 803 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 EID3Q8N140 333 aa16.12■□□□□ 0.17
LIG1-206ENST00000594067 GLB1L3Q8NCI6 653 aaPredicted RBP16.12■□□□□ 0.17
LIG1-206ENST00000594067 DBF4BQ8NFT6 615 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms