RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 SLCO1B1Q9Y6L6 691 aa20.23■□□□□ 0.83
PNKP-203ENST00000593946 SDHDO14521 159 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 KATNA1O75449 491 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 WDR47O94967 919 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR4F21O95013 312 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 EPORP19235 508 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 IDSP22304 550 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CD27P26842 260 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 EPHA3P29320 983 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CCNG1P51959 295 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 LRP8Q14114 963 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CLNKQ7Z7G1 428 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 GBP7Q8N8V2 638 aaPredicted RBP20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR5AR1Q8NGP9 310 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR9A1PQ8NGU1 263 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR5K2Q8NHB8 316 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 PPP1R36Q96LQ0 422 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CDK15Q96Q40 435 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 NTMT1Q9BV86 223 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CIDEBQ9UHD4 219 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 ZFP69BQ9UJL9 534 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 DGKBQ9Y6T7 804 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 FCHO1O14526 889 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 SCAMP1O15126 338 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 RPN2P04844 631 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 UROSP10746 265 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 HOXA6P31267 233 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 RPL6Q02878 288 aaKnown RBP20.22■□□□□ 0.83
PNKP-203ENST00000593946 PTK2BQ14289 1009 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 USP39Q53GS9 565 aaKnown RBP20.22■□□□□ 0.83
PNKP-203ENST00000593946 CCDC121Q6ZUS5 278 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 DCBLD1Q8N8Z6 715 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 PHC3Q8NDX5 983 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR4F6Q8NGB9 312 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 OR56A3Q8NH54 315 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 ZNF480Q8WV37 535 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 TWIST2Q8WVJ9 160 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 ATP6V1E2Q96A05 226 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 SLC6A18Q96N87 628 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 NUSAP1Q9BXS6 441 aaKnown RBP20.22■□□□□ 0.83
PNKP-203ENST00000593946 DNAJC11Q9NVH1 559 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 SLC22A14Q9Y267 594 aa20.22■□□□□ 0.83
PNKP-203ENST00000593946 CFAP20Q9Y6A4 193 aaKnown RBP20.22■□□□□ 0.83
PNKP-203ENST00000593946 TDRD6O60522 2096 aaKnown RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 TP53BP1Q12888 1972 aaPredicted RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 THADAQ6YHU6 1953 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 GOLGA8QA0A0J9YX86 632 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 SPTY2D1-AS1A0A0U1RR47 76 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 GOLGA8OA6NCC3 632 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 GOLGA8NF8WBI6 632 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 UBOX5O94941 541 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 SERPINA6P08185 405 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 THEGLP0DJG4 465 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 DMTNQ08495 405 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 GRB7Q14451 532 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 LSM12Q3MHD2 195 aaKnown RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 GALNTL6Q49A17 601 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 SLC36A4Q6YBV0 504 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 ACAD11Q709F0 780 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 DEFB119Q8N690 84 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 RAD51AP1Q96B01 352 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 C19orf60Q96EN9 201 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 PRR11Q96HE9 360 aaPredicted RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 INSM2Q96T92 566 aaPredicted RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 CCDC28BQ9BUN5 200 aa20.21■□□□□ 0.83
PNKP-203ENST00000593946 INTS7Q9NVH2 962 aaKnown RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 TRNAU1APQ9NX07 287 aaKnown RBP20.21■□□□□ 0.83
PNKP-203ENST00000593946 CCDC22O60826 627 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 CRCPO75575 148 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 ENO1P06733 434 aaKnown RBP20.2■□□□□ 0.82
PNKP-203ENST00000593946 AOC1P19801 751 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 ITPKAP23677 461 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 CTBSQ01459 385 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 DMWDQ09019 674 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 CDC16Q13042 620 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 NAE1Q13564 534 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 UAP1L1Q3KQV9 507 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 SPDYAQ5MJ70 313 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 METTL21CQ5VZV1 264 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 EFL1Q7Z2Z2 1120 aaKnown RBP20.2■□□□□ 0.82
PNKP-203ENST00000593946 RD3Q7Z3Z2 195 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 MILR1Q7Z6M3 343 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 TBC1D21Q8IYX1 336 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 CHCHD4Q8N4Q1 142 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 CDYL2Q8N8U2 506 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 C12orf66Q96MD2 445 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 TMEM168Q9H0V1 697 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 TUBB1Q9H4B7 451 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 AASDHPPTQ9NRN7 309 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 TIMM22Q9Y584 194 aa20.2■□□□□ 0.82
PNKP-203ENST00000593946 KIAA0754O94854 1291 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 EBLN1P0CF75 366 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 BCKDHBP21953 392 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 ARL1P40616 181 aaPredicted RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 FZD2Q14332 565 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 CLCA4Q14CN2 919 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 FAM91A1Q658Y4 838 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 THOC6Q86W42 341 aaKnown RBP20.19■□□□□ 0.82
PNKP-203ENST00000593946 HID1Q8IV36 788 aa20.19■□□□□ 0.82
PNKP-203ENST00000593946 SNX31Q8N9S9 440 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms