RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LMNTD1Q8N9Z9 388 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 SLC38A9Q8NBW4 561 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 EXTL1Q92935 676 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 KIAA1143Q96AT1 154 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 FAM136AQ96C01 138 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 SEMA4CQ9C0C4 833 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 FAM60AQ9NP50 221 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 C20orf96Q9NUD7 363 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 RNF14Q9UBS8 474 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 CIDEBQ9UHD4 219 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 CROTQ9UKG9 612 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 PADI1Q9ULC6 663 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 RUVBL2Q9Y230 463 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 VPS9D1Q9Y2B5 631 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 MED16Q9Y2X0 877 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 SNRNP200O75643 2136 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 BSNQ9UPA5 3926 aa17.87■□□□□ 0.45
SHKBP1-202ENST00000593764 FASNP49327 2511 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 ZNF891A8MT65 544 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 TP73O15350 636 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 C1orf105O95561 183 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 RPN2P04844 631 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 CHRM3P20309 590 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 SLC1A2P43004 574 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 DR1Q01658 176 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 KIR2DS3Q14952 304 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 TBR1Q16650 682 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 CDHR3Q6ZTQ4 885 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 SPNS2Q8IVW8 549 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 EXD3Q8N9H8 876 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 OR1L3Q8NH93 324 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 RUNDC3BQ96NL0 473 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 IL17FQ96PD4 163 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 SLC30A3Q99726 388 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 EBNA1BP2Q99848 306 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 TRIM51Q9BSJ1 452 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 EFHD1Q9BUP0 239 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 PLAC1Q9HBJ0 212 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 SYTL2Q9HCH5 934 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 LHX9Q9NQ69 397 aa17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 FBXO6Q9NRD1 293 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 MRPS18BQ9Y676 258 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-202ENST00000593764 EIF4E1BA6NMX2 242 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CCDC188H7C350 402 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 TTI1O43156 1089 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 HCRTR1O43613 425 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 KDM1AO60341 852 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 SCRG1O75711 98 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 MATN4O95460 622 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 MT-ND3P03897 115 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CCNYL3P0C7X3 344 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 PGAM1P18669 254 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CD9P21926 228 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 DLSTP36957 453 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 PAFAH1B1P43034 410 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 GABRA4P48169 554 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CLCN7P51798 805 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CRYMQ14894 314 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 MORF4L2Q15014 288 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CCSMST1Q4G0I0 132 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 HSP90AA5PQ58FG0 334 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 ACSBG2Q5FVE4 666 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 HIBCHQ6NVY1 386 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 TMEM126BQ8IUX1 230 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 FAM20CQ8IXL6 584 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 LMNTD2Q8IXW0 634 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 C2orf73Q8N5S3 287 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 ZBTB2Q8N680 514 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 C19orf47Q8N9M1 422 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 GSDMBQ8TAX9 411 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 PWWP2AQ96N64 755 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 CHRNA10Q9GZZ6 450 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 FBXO5Q9UKT4 447 aa17.85■□□□□ 0.45
SHKBP1-202ENST00000593764 COL6A6A6NMZ7 2263 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 A0A0J9YY10 115 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 KRT87PA6NCN2 255 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 ISM1B1AKI9 464 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 TMEM150CB9EJG8 249 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 H3BMH7 237 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 RASGRF2O14827 1237 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 PRICKLE3O43900 615 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 HAUS5O94927 633 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 ATP5DP30049 168 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 BDKRB1P46663 353 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 MPP1Q00013 466 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 GPS2Q13227 327 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 SLC5A12Q1EHB4 618 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 FAM199XQ6PEV8 388 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 CNSTQ6PJW8 725 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 ZNF517Q6ZMY9 492 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 OR2L8Q8NGY9 312 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 GIMAP7Q8NHV1 300 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 CALML6Q8TD86 181 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 DENND1AQ8TEH3 1009 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 CT55Q8WUE5 264 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 SKA2Q8WVK7 121 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 STARD8Q92502 1023 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 TCTN2Q96GX1 697 aa17.84■□□□□ 0.45
SHKBP1-202ENST00000593764 WDR83Q9BRX9 315 aaKnown RBP17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms