RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 ASMTP46597 345 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 AMPHP49418 695 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TAS2R40P59535 323 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 MRPS34P82930 218 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ACSM2AQ08AH3 577 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 COG2Q14746 738 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM266Q2M3C6 531 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF674Q2M3X9 581 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 MYLK3Q32MK0 819 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF718Q3SXZ3 478 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF672Q499Z4 452 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF805Q5CZA5 627 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 LRIF1Q5T3J3 769 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ACSM2BQ68CK6 577 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 CTR9Q6PD62 1173 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 BRAT1Q6PJG6 821 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PLEKHM3Q6ZWE6 761 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 KMT5CQ86Y97 462 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 NAGSQ8N159 534 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 IPMKQ8NFU5 416 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 OR1J2Q8NGS2 313 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 BBS10Q8TAM1 723 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 HM13Q8TCT9 377 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PIGTQ969N2 578 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TAAR8Q969N4 342 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TEKT1Q969V4 418 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 EXOC4Q96A65 974 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 FNBP1Q96RU3 617 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PCYT2Q99447 389 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 EPYCQ99645 322 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 SEPT5Q99719 369 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TEX13BQ9BXU2 312 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 KRTAP1-5Q9BYS1 174 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 TNMDQ9H2S6 317 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PIGMQ9H3S5 423 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF556Q9HAH1 456 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 EBF2Q9HAK2 575 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 SEPT11Q9NVA2 429 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 HOOK1Q9UJC3 728 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 MRPL11Q9Y3B7 192 aaKnown RBP4.75□□□□□ -1.65
SMAD4-216ENST00000593223 CLIC4Q9Y696 253 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 SESN1Q9Y6P5 492 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 AP1M2Q9Y6Q5 423 aa4.75□□□□□ -1.65
SMAD4-216ENST00000593223 PTPRCP08575 1304 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CGNL1Q0VF96 1302 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 PIK3C2AO00443 1686 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 KDM6AO15550 1401 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 SCN5AQ14524 2016 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 KANSL1LA0AUZ9 987 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 M0QX08 132 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 SCAMP1O15126 338 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 FMO6PO60774 539 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ERAL1O75616 437 aaKnown RBP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CAMTA2O94983 1202 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 KCNK5O95279 499 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CSH1P0DML2 217 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CSH2P0DML3 217 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CDH1P12830 882 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 IFNAR1P17181 557 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ITGA2P17301 1181 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 AMD1P17707 334 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 IL10P22301 178 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 KCNA5P22460 613 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 EEF1DP29692 281 aaKnown RBP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 GPC3P51654 580 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ISL1P61371 349 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CREB5Q02930 508 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 YWHAHQ04917 246 aaPredicted RBP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 KLHL30Q0D2K2 578 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TROAPQ12815 778 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 EPS8Q12929 822 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 PRPF4BQ13523 1007 aaKnown RBP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 DECR1Q16698 335 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 SYT16Q17RD7 645 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CEP55Q53EZ4 464 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM35AQ53FP2 167 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 C18orf63Q68DL7 685 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 GFRALQ6UXV0 394 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TMEM219Q86XT9 240 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TICAM1Q8IUC6 712 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CEP97Q8IW35 865 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.74□□□□□ -1.65
SMAD4-216ENST00000593223 C1orf87Q8N0U7 546 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 WDTC1Q8N5D0 677 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 C10orf53Q8N6V4 93 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ACVR1CQ8NER5 493 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 SHC3Q92529 594 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 MOAP1Q96BY2 351 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ZNF653Q96CK0 615 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 ELMOD3Q96FG2 381 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CALML4Q96GE6 196 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CABS1Q96KC9 395 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TCHPQ9BT92 498 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 MXD3Q9BW11 206 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CSTL1Q9H114 145 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 C1orf21Q9H246 121 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 PDE7BQ9NP56 450 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 TCF7L2Q9NQB0 619 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 DONSONQ9NYP3 566 aa4.74□□□□□ -1.65
SMAD4-216ENST00000593223 CGNQ9P2M7 1197 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms