RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CYP2A7P20853 494 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 NSG1P42857 185 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 PTGIRP43119 386 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ITGA1P56199 1179 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 KLF1Q13351 362 aaPredicted RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SNX1Q13596 522 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ITIH4Q14624 930 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 DBN1Q16643 649 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 P3H1Q32P28 736 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ZRANB3Q5FWF4 1079 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 PACS1Q6VY07 963 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF662Q6ZS27 426 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TAS2R42Q7RTR8 314 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SLC13A5Q86YT5 568 aaPredicted RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SYTL1Q8IYJ3 562 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TBC1D21Q8IYX1 336 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 ZBTB2Q8N680 514 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 FAM71DQ8N9W8 422 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 FDCSPQ8NFU4 85 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TRIM58Q8NG06 486 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SLC35B2Q8TB61 432 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 C1orf54Q8WWF1 131 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 TCTN2Q96GX1 697 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 OR2A14Q96R47 310 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 NRTNQ99748 197 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 DHRS4Q9BTZ2 278 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 LRRC40Q9H9A6 602 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 POLG2Q9UHN1 485 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 PYCARDQ9ULZ3 195 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 AP1M2Q9Y6Q5 423 aa10.06□□□□□ -0.8
VPS4B-207ENST00000591519 RP1L1Q8IWN7 2480 aaPredicted RBP10.06□□□□□ -0.8
VPS4B-207ENST00000591519 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 ERI2A8K979 691 aaKnown RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 E7EQ34 232 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 ZSCAN12O43309 604 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 ZNF749O43361 778 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 VPS4BO75351 444 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 KLF7O75840 302 aaPredicted RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 AP2A1O95782 977 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 CD63P08962 238 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 PRSS56P0CW18 603 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 TPBGLP0DKB5 382 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 AGXTP21549 392 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 STIP1P31948 543 aaKnown RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SHMT2P34897 504 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 GABRA4P48169 554 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 LMAN1P49257 510 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 PLOD1Q02809 727 aaPredicted RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 CHAF1BQ13112 559 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 PRKG2Q13237 762 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SSPNQ14714 243 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 NCF4Q15080 339 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 KCTD19Q17RG1 926 aaPredicted RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 NADK2Q4G0N4 442 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SPESP1Q6UW49 350 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 FAM198BQ6UWH4 519 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 UNC5AQ6ZN44 842 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 ARHGEF18Q6ZSZ5 1173 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 CDHR3Q6ZTQ4 885 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 LINC00523Q86TU6 105 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SLC35F6Q8N357 371 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 FLVCR1-AS1Q8TAF5 88 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 CPT1CQ8TCG5 803 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SGSM3Q96HU1 749 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 IP6K3Q96PC2 410 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SMAD5Q99717 465 aaKnown RBP10.05□□□□□ -0.8
VPS4B-207ENST00000591519 C17orf62Q9BQA9 187 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 TMEM121Q9BTD3 319 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 XKR8Q9H6D3 395 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 FAM60AQ9NP50 221 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 OR6C2Q9NZP2 312 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 C5AR2Q9P296 337 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 VPS4AQ9UN37 437 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 ICKQ9UPZ9 632 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 PRSS21Q9Y6M0 314 aa10.05□□□□□ -0.8
VPS4B-207ENST00000591519 SHANK1Q9Y566 2161 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 SPENQ96T58 3664 aaKnown RBP10.04□□□□□ -0.8
VPS4B-207ENST00000591519 DPM1O60762 260 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 FGGP02679 453 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 FTH1P02794 183 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 PVRP15151 417 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 UGT2B7P16662 529 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 FOXN2P32314 431 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 RRADP55042 308 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 GDF10P55107 478 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 POU6F1Q14863 301 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 ZIC1Q15915 447 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 PTCHD3Q3KNS1 767 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 LYPLAL1Q5VWZ2 237 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 RHBDD2Q6NTF9 364 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 JMJD6Q6NYC1 403 aaPredicted RBP10.04□□□□□ -0.8
VPS4B-207ENST00000591519 PRUNE1Q86TP1 453 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 GPR135Q8IZ08 494 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 DNAJC22Q8N4W6 341 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 C19orf47Q8N9M1 422 aaKnown RBP10.04□□□□□ -0.8
VPS4B-207ENST00000591519 Q8NA96 180 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 OR5AR1Q8NGP9 310 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 OR5K2Q8NHB8 316 aa10.04□□□□□ -0.8
VPS4B-207ENST00000591519 UBE2Q2Q8WVN8 375 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms