RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 LEF1Q9UJU2 399 aaPredicted RBP14.87□□□□□ -0.03
CIRBP-228ENST00000590347 NME7Q9Y5B8 376 aa14.87□□□□□ -0.03
CIRBP-228ENST00000590347 PNMA8CA0A1B0GUJ8 204 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 KCNJ13O60928 360 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 B3GALNT1O75752 331 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 WDR47O94967 919 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SERPINA1P01009 418 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 PTHP01270 115 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ITGB1P05556 798 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 HTR1EP28566 365 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ICAM3P32942 547 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CSRP3P50461 194 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 DAPP51397 102 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 AP2S1P53680 142 aaPredicted RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 DNAJB13P59910 316 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CDH17Q12864 832 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 TRIM71Q2Q1W2 868 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ABHD15Q6UXT9 468 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ATG16L2Q8NAA4 619 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 NT5C1AQ9BXI3 368 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF302Q9NR11 478 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ABCG2Q9UNQ0 655 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 H0YCG3 227 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 PAPSS2O95340 614 aaPredicted RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 UBA1P22314 1058 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 GRIK1P39086 918 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 EEFSECP57772 596 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CTAG1AP78358 180 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 PRKCDQ05655 676 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 RCAN2Q14206 197 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ARMCX4Q5H9R4 360 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 NADSYN1Q6IA69 706 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CFAP77Q6ZQR2 320 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CDYL2Q8N8U2 506 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ZFAND1Q8TCF1 268 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF583Q96ND8 569 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 KCNC2Q96PR1 638 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 KIFC1Q9BW19 673 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SORBS1Q9BX66 1292 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 MINDY3Q9H8M7 445 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ERVMER34-1Q9H9K5 563 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SLAMF7Q9NQ25 335 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SNTG1Q9NSN8 517 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SOWAHBA6NEL2 793 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 I6L893 689 aaPredicted RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 SHOXO15266 292 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 PDPK1O15530 556 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ARIH2O95376 493 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 BMP1P13497 986 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ITGA2P17301 1181 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 TNNI3P19429 210 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 IDH2P48735 452 aaKnown RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ATN1P54259 1190 aaPredicted RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 CDH18Q13634 790 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 DOC2BQ14184 412 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 MED22Q15528 200 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 C9orf131Q5VYM1 1079 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 LAMTOR1Q6IAA8 161 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 LCLAT1Q6UWP7 414 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 ISCA2Q86U28 154 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 PROSER1Q86XN7 944 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 LILRB1Q8NHL6 650 aaPredicted RBP14.86□□□□□ -0.03
CIRBP-228ENST00000590347 MAGEL2Q9UJ55 1249 aa14.86□□□□□ -0.03
CIRBP-228ENST00000590347 TYW5A2RUC4 315 aaKnown RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 HACD1B0YJ81 288 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 ARL2P36404 184 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 CCT3P49368 545 aaKnown RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 FAM189BP81408 668 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 EMX2Q04743 252 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 OR4D1Q15615 310 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 HECTD2Q5U5R9 776 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 ATF7IP2Q5U623 682 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 PKN3Q6P5Z2 889 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 HFE2Q6ZVN8 426 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 P3H2Q8IVL5 708 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 FBXO16Q8IX29 292 aaPredicted RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 PJA1Q8NG27 643 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 RHBDF1Q96CC6 855 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 SPATC1LQ9H0A9 340 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 MCUBQ9NWR8 336 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 KIF17Q9P2E2 1029 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 SUPT3HB4E1H0 165 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 PRSS56P0CW18 603 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 UGT2B15P54855 530 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 HSPA14Q0VDF9 509 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 SETMARQ53H47 684 aaPredicted RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 LIPIQ6XZB0 460 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF598Q86UK7 904 aaKnown RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 ZNF419Q96HQ0 510 aaPredicted RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 GON7Q9BXV9 100 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 PDP1Q9P0J1 537 aaPredicted RBP14.85□□□□□ -0.03
CIRBP-228ENST00000590347 CPA4Q9UI42 421 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 FZD10Q9ULW2 581 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 ADAMTS5Q9UNA0 930 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 KCTD3Q9Y597 815 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 PEX16Q9Y5Y5 336 aa14.85□□□□□ -0.03
CIRBP-228ENST00000590347 B4DXG7 233 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms