RNA–Protein interactions for RNA: ENST00000589054.5

NEDD4L-225, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3 BASIC

Gene NEDD4L, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-225ENST00000589054 ZNF449Q6P9G9 518 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 MRGPREQ86SM8 312 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 TMEM102Q8N9M5 508 aaPredicted RBP20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 C1orf54Q8WWF1 131 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 IL17FQ96PD4 163 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 AP1M1Q9BXS5 423 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 SLC7A5P2Q9GIP4 190 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 CHRNA10Q9GZZ6 450 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 OR6C2Q9NZP2 312 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 MARCH4Q9P2E8 410 aaPredicted RBP20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 VPS4AQ9UN37 437 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 ICE1Q9Y2F5 2266 aa20.56■□□□□ 0.88
NEDD4L-225ENST00000589054 TCP11X1B4DZS4 312 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 KRT86O43790 486 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 PTMAP06454 111 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 UMODP07911 640 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 ZSCAN5DPP0CG00 497 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 PKLRP30613 574 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 CDH17Q12864 832 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 MRPL49Q13405 166 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 MRPL14Q6P1L8 145 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 MED25Q71SY5 747 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 GPR135Q8IZ08 494 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 KRT222Q8N1A0 295 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 DNAAF3Q8N9W5 541 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■■■■■ 37.9
NEDD4L-225ENST00000589054 LRRC45Q96CN5 670 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 DPH2Q9BQC3 489 aaPredicted RBP20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 CASS4Q9NQ75 786 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 POLG2Q9UHN1 485 aa20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 PTRH2Q9Y3E5 179 aaKnown RBP20.55■□□□□ 0.88
NEDD4L-225ENST00000589054 KRT87PA6NCN2 255 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 ISM1B1AKI9 464 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 GPC4O75487 556 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 ZNF189O75820 626 aaPredicted RBP20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 OR56A5P0C7T3 313 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 AGXTP21549 392 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 KYNUQ16719 465 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 PLEKHN1Q494U1 663 aaPredicted RBP20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 PPP1R32Q7Z5V6 425 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 LINC00523Q86TU6 105 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 SLC22A15Q8IZD6 547 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 SYCE1Q8N0S2 351 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 EFCAB3Q8N7B9 438 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 OR4L1Q8NH43 312 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 ALS2CR12Q96Q35 445 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 RANBP9Q96S59 729 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 ZBTB20Q9HC78 741 aaPredicted RBP20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 GPR83Q9NYM4 423 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 PCDHGB7Q9Y5F8 929 aa20.54■□□□□ 0.88
NEDD4L-225ENST00000589054 SPTBN1Q01082 2364 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 CCDC88CQ9P219 2028 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 SNRNP200O75643 2136 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 HEATR9A2RTY3 570 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 C9J4A7 227 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 ZSCAN9O15535 394 aaPredicted RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 MAP3K7O43318 606 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 IFNB1P01574 187 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 HBQ1P09105 142 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 MAGP20916 626 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 DCDP81605 110 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 HSPA14Q0VDF9 509 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 KIF5AQ12840 1032 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 SNX1Q13596 522 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 SSPNQ14714 243 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 SLC5A12Q1EHB4 618 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 EIF2S3LQ2VIR3 472 aaKnown RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 SYTL3Q4VX76 610 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 HOOK3Q86VS8 718 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 DTWD1Q8N5C7 304 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 INPP5DQ92835 1189 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 DHRS4Q9BTZ2 278 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 ZNF552Q9H707 407 aaPredicted RBP20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 EURLQ9NYK6 297 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 RIMKLBQ9ULI2 386 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 TCAF1Q9Y4C2 921 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 AP1M2Q9Y6Q5 423 aa20.53■□□□□ 0.88
NEDD4L-225ENST00000589054 QSOX1O00391 747 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 DPM1O60762 260 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 ADRA1DP25100 572 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 MCM3P25205 808 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 STIP1P31948 543 aaKnown RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 GRIA3P42263 894 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 SIX1Q15475 284 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 NKAIN1Q4KMZ8 207 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 FCRL6Q6DN72 434 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 AFTPHQ6ULP2 937 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 TAX1BP1Q86VP1 789 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 RAB43Q86YS6 212 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 SLC13A5Q86YT5 568 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 OR6P1Q8NGX9 317 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 CFAP61Q8NHU2 1237 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 N4BP2L2Q92802 583 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 CHRAC1Q9NRG0 131 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 RAB6BQ9NRW1 208 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 IFT80Q9P2H3 777 aaPredicted RBP20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 PLCL2Q9UPR0 1127 aa20.52■□□□□ 0.88
NEDD4L-225ENST00000589054 ERI2A8K979 691 aaKnown RBP20.51■□□□□ 0.87
NEDD4L-225ENST00000589054 AGFG2O95081 481 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms