RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PJA2O43164 708 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 TJP3O95049 919 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 CLDN1O95832 211 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 ALBP02768 609 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 FTH1P02794 183 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 CHRM5P08912 532 aaPredicted RBP13.48□□□□□ -0.25
VMP1-209ENST00000588915 PIM1P11309 404 aaPredicted RBP13.48□□□□□ -0.25
VMP1-209ENST00000588915 ARSFP54793 590 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 TBX2Q13207 712 aaPredicted RBP13.48□□□□□ -0.25
VMP1-209ENST00000588915 SPA17Q15506 151 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 ZIC1Q15915 447 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 CYP2A13Q16696 494 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 YOD1Q5VVQ6 348 aaPredicted RBP13.48□□□□□ -0.25
VMP1-209ENST00000588915 KCTD11Q693B1 232 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 IGFL2Q6UWQ7 119 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 PACS1Q6VY07 963 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 TICAM1Q8IUC6 712 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 SLC34A3Q8N130 599 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 ST6GALNAC3Q8NDV1 305 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 OR5AR1Q8NGP9 310 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 CCDC110Q8TBZ0 833 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 UBE2Q2Q8WVN8 375 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 FKBP10Q96AY3 582 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 VPS50Q96JG6 964 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 LRRC40Q9H9A6 602 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 ENAMQ9NRM1 1142 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 PCDHGA10Q9Y5H3 936 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 PCDHA13Q9Y5I0 950 aa13.48□□□□□ -0.25
VMP1-209ENST00000588915 MACROD2A1Z1Q3 448 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 PSMD3O43242 534 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 HCRTR1O43613 425 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 UMODP07911 640 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 OR56A5P0C7T3 313 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 TPBGLP0DKB5 382 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 MMP11P24347 488 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 DBN1Q16643 649 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 ZNF787Q6DD87 383 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 PIANPQ8IYJ0 282 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 ZNF655Q8N720 491 aaPredicted RBP13.47□□□□□ -0.25
VMP1-209ENST00000588915 PPP4R1Q8TF05 950 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 ELMO1Q92556 727 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 SLC22A18Q96BI1 424 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 ALS2CR12Q96Q35 445 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 RANBP9Q96S59 729 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 TTC1Q99614 292 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 WDR77Q9BQA1 342 aaPredicted RBP13.47□□□□□ -0.25
VMP1-209ENST00000588915 WDR54Q9H977 334 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 SPHK1Q9NYA1 384 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 EURLQ9NYK6 297 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 DHCR7Q9UBM7 475 aaKnown RBP13.47□□□□□ -0.25
VMP1-209ENST00000588915 CDYLQ9Y232 598 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 FER1L5A0AVI2 2057 aa13.47□□□□□ -0.25
VMP1-209ENST00000588915 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 CELSR2Q9HCU4 2923 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 CCL22O00626 93 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 CNOT3O75175 753 aaKnown RBP13.46□□□□□ -0.25
VMP1-209ENST00000588915 FKBP9O95302 570 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 COL8A1P27658 744 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 GCGRP47871 477 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 GLRBP48167 497 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 RWDD2BP57060 319 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 SPARCL1Q14515 664 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 DEFB110Q30KQ9 67 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 ARHGEF18Q6ZSZ5 1173 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 OVCH1Q7RTY7 1134 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 CUZD1Q86UP6 607 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 TRIM73Q86UV7 250 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 INPP5DQ92835 1189 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 SLC26A1Q9H2B4 701 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 IL1RAPL1Q9NZN1 696 aa13.46□□□□□ -0.25
VMP1-209ENST00000588915 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
VMP1-209ENST00000588915 MROH6A6NGR9 719 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 ISM1B1AKI9 464 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 BHMG1C9JSJ3 638 aaPredicted RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 RPN2P04844 631 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 PRSS56P0CW18 603 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 ITGA3P26006 1051 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 MSNP26038 577 aaKnown RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 RAB28P51157 221 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 P3H1Q32P28 736 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 DNAJC21Q5F1R6 531 aaKnown RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 TCTE1Q5JU00 501 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 AGAP7PQ5VUJ5 663 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 B3GNTL1Q67FW5 361 aaPredicted RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 LINC00523Q86TU6 105 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 KCNMB4Q86W47 210 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 AGAP4Q96P64 663 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 MRM3Q9HC36 420 aaKnown RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 SLC22A11Q9NSA0 550 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 INTS7Q9NVH2 962 aaKnown RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 IRAK4Q9NWZ3 460 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
VMP1-209ENST00000588915 NTNG1Q9Y2I2 539 aa13.45□□□□□ -0.26
VMP1-209ENST00000588915 PRSS21Q9Y6M0 314 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms