RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CTSL3PQ5NE16 218 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 TTC23LQ6PF05 361 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 CES3Q6UWW8 571 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 OR1L3Q8NH93 324 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 FLVCR1-AS1Q8TAF5 88 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 SLC22A18Q96BI1 424 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 SERPINB12Q96P63 405 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 ACTL8Q9H568 366 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 SPHK1Q9NYA1 384 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 PLAGL1Q9UM63 463 aa13.96□□□□□ -0.17
DDX39A-208ENST00000588692 E7EQ34 232 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 SNRNP200O75643 2136 aaKnown RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 HBQ1P09105 142 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ATP5DP30049 168 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 MAGEA3P43357 314 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 DHX34Q14147 1143 aaKnown RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ERV3-1Q14264 604 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 KCTD19Q17RG1 926 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 DEFB109BQ30KR1 87 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF789Q5FWF6 425 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 IZUMO3Q5VZ72 239 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 NEPROQ6NW34 567 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 CDHR3Q6ZTQ4 885 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 SYVN1Q86TM6 617 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 TMEM135Q86UB9 458 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 LMNTD2Q8IXW0 634 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 GPR135Q8IZ08 494 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 DSELQ8IZU8 1212 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 RAB42Q8N4Z0 105 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 NAT8LQ8N9F0 302 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 N4BP2L2Q92802 583 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 MR1Q95460 341 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 RAD51AP1Q96B01 352 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF669Q96BR6 464 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 CLIP3Q96DZ5 547 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 FOPNLQ96NB1 174 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 BIRC8Q96P09 236 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 DPH2Q9BQC3 489 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 MENTQ9BUN1 341 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 KLHL25Q9H0H3 589 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ACTR5Q9H9F9 607 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 INTS10Q9NVR2 710 aaKnown RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 TRMT1Q9NXH9 659 aaKnown RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 POLHQ9Y253 713 aa13.95□□□□□ -0.18
DDX39A-208ENST00000588692 HEMK1Q9Y5R4 338 aaPredicted RBP13.95□□□□□ -0.18
DDX39A-208ENST00000588692 ISM1B1AKI9 464 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 GOLGA8KD6RF30 607 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 GOLGA8TH3BQL2 631 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 MEN1O00255 615 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 RASGRF2O14827 1237 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 S1PR4O95977 384 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 CD9P21926 228 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 PTPN4P29074 926 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 FMO4P31512 558 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 RORAP35398 523 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 CCNFP41002 786 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 GRB7Q14451 532 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 ANKRD20A4Q4UJ75 823 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 ATP1A1-AS1Q5TC04 95 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 FAM199XQ6PEV8 388 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-208ENST00000588692 TRIM73Q86UV7 250 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 CILP2Q8IUL8 1156 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 PPIL6Q8IXY8 311 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SLC38A9Q8NBW4 561 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 OR2L8Q8NGY9 312 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 CFAP61Q8NHU2 1237 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 MAGEC3Q8TD91 643 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SKA2Q8WVK7 121 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SLCO2A1Q92959 643 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 PDLIM2Q96JY6 352 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SLC7A5P2Q9GIP4 190 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 AKIRIN1Q9H9L7 192 aaPredicted RBP13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SLC39A10Q9ULF5 831 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 AP1M2Q9Y6Q5 423 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 SPTBP11277 2137 aa13.94□□□□□ -0.18
DDX39A-208ENST00000588692 CDC14CA4D256 554 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 GOLGA8MH3BSY2 632 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 USP1O94782 785 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 FKBP9O95302 570 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 RAB40ALP0C0E4 278 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PEBP1P30086 187 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 THOC5Q13769 683 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 GBX1Q14549 363 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PPP1R7Q15435 360 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 UGT8Q16880 541 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF470Q6ECI4 717 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CENPUQ71F23 418 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 SYTL1Q8IYJ3 562 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 LINC01555Q8NAE3 123 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 CHST8Q9H2A9 424 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 FAM60AQ9NP50 221 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 PCMTD2Q9NV79 361 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 INTS7Q9NVH2 962 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 FARSAQ9Y285 508 aaKnown RBP13.93□□□□□ -0.18
DDX39A-208ENST00000588692 ZCWPW2A0A1B0GU75 182 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 E5RI56 91 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 ZNF185O15231 689 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 SLC28A2O43868 658 aa13.93□□□□□ -0.18
DDX39A-208ENST00000588692 NIPSNAP2O75323 286 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms