RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 TLCD2A6NGC4 264 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 EFCAB7A8K855 629 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ARHGEF33A8MVX0 844 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 EIF3FO00303 357 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 MATN2O00339 956 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CHRM5P08912 532 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 RBMS1P29558 406 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PRDX3P30048 256 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PEBP1P30086 187 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 STX2P32856 288 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CCNFP41002 786 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 SEPHS1P49903 392 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 RAB28P51157 221 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 MAPK10P53779 464 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ERVPABLB-1P60509 514 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PRKAA1Q13131 559 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 EEF1AKMT2Q5JPI9 291 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 FBXO38Q6PIJ6 1188 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CEP128Q6ZU80 1094 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PIWIL4Q7Z3Z4 852 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CLEC14AQ86T13 490 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 FLVCR1-AS1Q8TAF5 88 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ASB11Q8WXH4 323 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PMEPA1Q969W9 287 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 RAD51AP1Q96B01 352 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ELMO2Q96JJ3 720 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ZNF578Q96N58 590 aaPredicted RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CPNE1Q99829 537 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 CDC42EP4Q9H3Q1 356 aaKnown RBP19.57■□□□□ 0.72
DDX39A-207ENST00000588542 SPHK1Q9NYA1 384 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 ACTR10Q9NZ32 417 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 OR6C2Q9NZP2 312 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 SDK2Q58EX2 2172 aa19.57■□□□□ 0.72
DDX39A-207ENST00000588542 PIPSLA2A3N6 862 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 GSAPA4D1B5 854 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 B4E171 279 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 C9orf172C9J069 976 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 GFYI3L273 518 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 RASGRF2O14827 1237 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 KDM1AO60341 852 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 TSPAN12O95859 305 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 NELFEP18615 380 aaKnown RBP19.56■□□□□ 0.72
DDX39A-207ENST00000588542 TSPAN7P41732 249 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 MC2RQ01718 297 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 EFTUD2Q15029 972 aaKnown RBP eCLIP19.56■□□□□ 0.724e-7■■■■□ 26.6
DDX39A-207ENST00000588542 TTC23LQ6PF05 361 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 PROSER1Q86XN7 944 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 FAM129CQ86XR2 697 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 DENND1AQ8TEH3 1009 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 UBXN4Q92575 508 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 USP7Q93009 1102 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 VPS39Q96JC1 886 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 SLC41A2Q96JW4 573 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 RBBP8Q99708 897 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 MTO1Q9Y2Z2 717 aaKnown RBP19.56■□□□□ 0.72
DDX39A-207ENST00000588542 PCDHGA7Q9Y5G6 932 aa19.56■□□□□ 0.72
DDX39A-207ENST00000588542 C2orf74A8MZ97 194 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 GP5P40197 560 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 TAS2R39P59534 338 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 PDAP1Q13442 181 aaKnown RBP19.55■□□□□ 0.72
DDX39A-207ENST00000588542 TEX35Q5T0J7 233 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 TMEM207Q6UWW9 146 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 CTAGE3PQ8IX95 158 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 CARFQ8N187 725 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 PPM1NQ8N819 430 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 FBXO15Q8NCQ5 510 aaPredicted RBP19.55■□□□□ 0.72
DDX39A-207ENST00000588542 OR2L8Q8NGY9 312 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 MAGEC3Q8TD91 643 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 OR2A14Q96R47 310 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 FUT8Q9BYC5 575 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 PITPNM3Q9BZ71 974 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 C1GALT1Q9NS00 363 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 THSD1Q9NS62 852 aa19.55■□□□□ 0.72
DDX39A-207ENST00000588542 URB1O60287 2271 aaKnown RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 MYO1CO00159 1063 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 NVLO15381 856 aaKnown RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 PRAMEF10O60809 474 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 FAM155BO75949 473 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 CATP04040 527 aaKnown RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 ERGP11308 486 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 UGT2B7P16662 529 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 SLC5A2P31639 672 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 RGS4P49798 205 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 SH3BP2P78314 561 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 ILF2Q12905 390 aaKnown RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 NAB1Q13506 487 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 SPESP1Q6UW49 350 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 KMT5CQ86Y97 462 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 CEP97Q8IW35 865 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 C2orf73Q8N5S3 287 aaPredicted RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 OR9A1PQ8NGU1 263 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 SNIP1Q8TAD8 396 aaKnown RBP19.54■□□□□ 0.72
DDX39A-207ENST00000588542 DLG3Q92796 817 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 FGF11Q92914 225 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 LINGO1Q96FE5 620 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 TAAR9Q96RI9 348 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 GPR22Q99680 433 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 B3GNT4Q9C0J1 378 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 APMAPQ9HDC9 416 aa19.54■□□□□ 0.72
DDX39A-207ENST00000588542 FBXO8Q9NRD0 319 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms