RNA–Protein interactions for RNA: ENST00000586588.5

DNMT1-207, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 3,094 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-207ENST00000586588 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.85□□□□□ -0.35
DNMT1-207ENST00000586588 OR51E2Q9H255 320 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 LIN7BQ9HAP6 207 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 HEBP1Q9NRV9 189 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 IPPQ9Y573 584 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 AUP1Q9Y679 476 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 PCM1Q15154 2024 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 SYNJ2BP-COX16A0A087WUM0 186 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 MT-CYBP00156 380 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-207ENST00000586588 MYL9P24844 172 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 MBTD1Q05BQ5 628 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 IRF3Q14653 427 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 SNX20Q7Z614 316 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 CYP4Z2PQ8N1L4 340 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 GLB1L3Q8NCI6 653 aaPredicted RBP12.85□□□□□ -0.35
DNMT1-207ENST00000586588 OR10A6Q8NH74 314 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 FRMD6Q96NE9 622 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 ATOH8Q96SQ7 321 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 TTLL2Q9BWV7 592 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 GTPBP2Q9BX10 602 aaKnown RBP12.85□□□□□ -0.35
DNMT1-207ENST00000586588 TFB2MQ9H5Q4 396 aaKnown RBP12.85□□□□□ -0.35
DNMT1-207ENST00000586588 TIGARQ9NQ88 270 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 COX16Q9P0S2 106 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 PSORS1C1Q9UIG5 152 aa12.85□□□□□ -0.35
DNMT1-207ENST00000586588 PHIPQ8WWQ0 1821 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 LINC00862A6NCI5 91 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 E9PQ18 207 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 TLL1O43897 1013 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 OR2B3O76000 313 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 RGS6P49758 472 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 MAPK12P53778 367 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 SCN1BQ07699 218 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 CYP4F3Q08477 520 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 HYAL2Q12891 473 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 ANKS6Q68DC2 871 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 IL31Q6EBC2 164 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 CDYL2Q8N8U2 506 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 ZNF675Q8TD23 568 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 APH1BQ8WW43 257 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 MCCC1Q96RQ3 725 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 MUTYHQ9UIF7 546 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 STOML2Q9UJZ1 356 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 ENPP3O14638 875 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 TFECO14948 347 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 PCDHGA12O60330 932 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 CREG1O75629 220 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 DDNO94850 711 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 HOXA9P31269 272 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 CSTF2P33240 577 aaKnown RBP eCLIP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 SRP54P61011 504 aaKnown RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 IKZF1Q13422 519 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 OR4D1Q15615 310 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 FAM214AQ32MH5 1076 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 TIMM50Q3ZCQ8 353 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 DCAF15Q66K64 600 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 RANBP10Q6VN20 620 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 LRRC71Q8N4P6 559 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 YIPF7Q8N8F6 280 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 FNDC5Q8NAU1 212 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 PYURFQ96I23 114 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 C2orf49Q9BVC5 232 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 MMP28Q9H239 520 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 RNF167Q9H6Y7 350 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 GLOD4Q9HC38 313 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 AASDHPPTQ9NRN7 309 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 VNN3Q9NY84 501 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 TNFRSF10DQ9UBN6 386 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.84□□□□□ -0.35
DNMT1-207ENST00000586588 V9GYH0 126 aa12.84□□□□□ -0.35
DNMT1-207ENST00000586588 SLC35F4A4IF30 521 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 CDK1P06493 297 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 FDXRP22570 491 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 ADORA2BP29275 332 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 TALDO1P37837 337 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 CCDC71Q8IV32 467 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 SH3KBP1Q96B97 665 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 CHCHD6Q9BRQ6 235 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 THUMPD3Q9BV44 507 aaKnown RBP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 FAM83DQ9H4H8 585 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 RASSF1Q9NS23 344 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 ANKRD12Q6UB98 2062 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 A0A096LPI6 279 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 B4DXG7 233 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 SEC14L5O43304 696 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 S1PR4O95977 384 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 C21orf33P30042 268 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 YWHAHQ04917 246 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 BAK1Q16611 211 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 SOWAHCQ53LP3 525 aaPredicted RBP12.83□□□□□ -0.36
DNMT1-207ENST00000586588 HDDC2Q7Z4H3 204 aa12.83□□□□□ -0.36
DNMT1-207ENST00000586588 RNF130Q86XS8 419 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms