RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DARS2Q6PI48 645 aaKnown RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 HOOK3Q86VS8 718 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 TICAM1Q8IUC6 712 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 CDKL3Q8IVW4 592 aaPredicted RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 ZNF655Q8N720 491 aaPredicted RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 STYXQ8WUJ0 223 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 C5orf34Q96MH7 638 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 FAM118BQ9BPY3 351 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 OSBPL8Q9BZF1 889 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 ILKAPQ9H0C8 392 aaPredicted RBP13.94□□□□□ -0.18
SDF2-202ENST00000585428 SRPK3Q9UPE1 567 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 PLCL2Q9UPR0 1127 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 ASF1AQ9Y294 204 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 PCDHGA10Q9Y5H3 936 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 PCDHA13Q9Y5I0 950 aa13.94□□□□□ -0.18
SDF2-202ENST00000585428 SEC16AO15027 2179 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 A0A0J9YY10 115 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 PJA2O43164 708 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 STK10O94804 968 aaKnown RBP13.93□□□□□ -0.18
SDF2-202ENST00000585428 AP2A1O95782 977 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 NSG1P42857 185 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 GLRBP48167 497 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 KIR2DS3Q14952 304 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 SLC5A12Q1EHB4 618 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 IGFL2Q6UWQ7 119 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 KCNMB4Q86W47 210 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 TMTC1Q8IUR5 882 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 TM9SF4Q92544 642 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 ENAMQ9NRM1 1142 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 SMARCAL1Q9NZC9 954 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 NDOR1Q9UHB4 597 aa13.93□□□□□ -0.18
SDF2-202ENST00000585428 RP1L1Q8IWN7 2480 aaPredicted RBP13.93□□□□□ -0.18
SDF2-202ENST00000585428 METTL18O95568 372 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 ITGAXP20702 1163 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 MMP11P24347 488 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 PEBP1P30086 187 aaKnown RBP13.92□□□□□ -0.18
SDF2-202ENST00000585428 PLOD1Q02809 727 aaPredicted RBP13.92□□□□□ -0.18
SDF2-202ENST00000585428 AIMP2Q13155 320 aaKnown RBP13.92□□□□□ -0.18
SDF2-202ENST00000585428 BRD3Q15059 726 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 PACS1Q6VY07 963 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 NAPRTQ6XQN6 538 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 OVCH1Q7RTY7 1134 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 TC2NQ8N9U0 490 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 ST6GALNAC3Q8NDV1 305 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 NDC1Q9BTX1 674 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 TXLNGQ9NUQ3 528 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 EURLQ9NYK6 297 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 TDRKHQ9Y2W6 561 aaKnown RBP13.92□□□□□ -0.18
SDF2-202ENST00000585428 CSAG2Q9Y5P2 127 aa13.92□□□□□ -0.18
SDF2-202ENST00000585428 QSOX1O00391 747 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 TJP3O95049 919 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 ALBP02768 609 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 FTH1P02794 183 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 ALAS2P22557 587 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 CTNNA2P26232 953 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 ELOAQ14241 798 aaKnown RBP13.91□□□□□ -0.18
SDF2-202ENST00000585428 ITIH4Q14624 930 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 SLC9A5Q14940 896 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 CYP2A13Q16696 494 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 PRAMEF13Q5VWM6 474 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 C1QL3Q5VWW1 255 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 AADACL2Q6P093 401 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 MCATQ8IVS2 390 aaKnown RBP13.91□□□□□ -0.18
SDF2-202ENST00000585428 FAM20CQ8IXL6 584 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 CCDC170Q8IYT3 715 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 ELMO1Q92556 727 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 ALG3Q92685 438 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 LRRC45Q96CN5 670 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 SLC26A1Q9H2B4 701 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 DUSP10Q9Y6W6 482 aa13.91□□□□□ -0.18
SDF2-202ENST00000585428 RCCD1A6NED2 376 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 OR51F1A6NGY5 319 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 ISM1B1AKI9 464 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 SOCS6O14544 535 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 ZNF189O75820 626 aaPredicted RBP13.9□□□□□ -0.18
SDF2-202ENST00000585428 ARSFP54793 590 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 RWDD2BP57060 319 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 POU6F1Q14863 301 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 KIRREL2Q6UWL6 708 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 SLC34A3Q8N130 599 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 LINC01555Q8NAE3 123 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 DENND1AQ8TEH3 1009 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 PPP4R1Q8TF05 950 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 FKBP10Q96AY3 582 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 CALR3Q96L12 384 aaKnown RBP13.9□□□□□ -0.18
SDF2-202ENST00000585428 WDR77Q9BQA1 342 aaPredicted RBP13.9□□□□□ -0.18
SDF2-202ENST00000585428 WDR54Q9H977 334 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 LRRC40Q9H9A6 602 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 SLC6A20Q9NP91 592 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 LUC7LQ9NQ29 371 aaKnown RBP13.9□□□□□ -0.18
SDF2-202ENST00000585428 AGPAT4Q9NRZ5 378 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 FBXL4Q9UKA2 621 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 PLAGL1Q9UM63 463 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 KLHL20Q9Y2M5 609 aa13.9□□□□□ -0.18
SDF2-202ENST00000585428 PIKFYVEQ9Y2I7 2098 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms