RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 PIKFYVEQ9Y2I7 2098 aa11.97□□□□□ -0.49
SS18-225ENST00000585121 FAM237BA0A1B0GVD1 139 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 CDC14CA4D256 554 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 GOLGA8KD6RF30 607 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 GOLGA8TH3BQL2 631 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 GOLGA8MH3BSY2 632 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 CREG1O75629 220 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 ESR1P03372 595 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 PVRP15151 417 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 TCP1P17987 556 aaKnown RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 CHRM3P20309 590 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 OGNP20774 298 aaKnown RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 PTPN4P29074 926 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 DHX34Q14147 1143 aaKnown RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 KYNUQ16719 465 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 SLC5A12Q1EHB4 618 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 ANKRD22Q5VYY1 191 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 NEPROQ6NW34 567 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 FAM199XQ6PEV8 388 aaPredicted RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 TRIM73Q86UV7 250 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 CAND1Q86VP6 1230 aaKnown RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 VRK3Q8IV63 474 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 OR1L3Q8NH93 324 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 MAGEC3Q8TD91 643 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 LRFN5Q96NI6 719 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 OR2A14Q96R47 310 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 STARD5Q9NSY2 213 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 IRAK4Q9NWZ3 460 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 CDYLQ9Y232 598 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 FARSAQ9Y285 508 aaKnown RBP11.96□□□□□ -0.49
SS18-225ENST00000585121 MAD1L1Q9Y6D9 718 aa11.96□□□□□ -0.49
SS18-225ENST00000585121 TLN1Q9Y490 2541 aaKnown RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 CTAGE9A4FU28 777 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 E5RI56 91 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 MEN1O00255 615 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 TERTO14746 1132 aaKnown RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 SLC28A2O43868 658 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 TMEM63AO94886 807 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 PLA2G2AP14555 144 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ARNTP27540 789 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 PKLRP30613 574 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 CCNFP41002 786 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ADARP55265 1226 aaKnown RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 KCTD19Q17RG1 926 aaPredicted RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 TYSND1Q2T9J0 566 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ANKRD20A4Q4UJ75 823 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ATP1A1-AS1Q5TC04 95 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 CDHR3Q6ZTQ4 885 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 PRICKLE2Q7Z3G6 844 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 PPIL6Q8IXY8 311 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ZNF669Q96BR6 464 aaPredicted RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 SERPINB12Q96P63 405 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 DPH2Q9BQC3 489 aaPredicted RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 CHRNA10Q9GZZ6 450 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 CCDC68Q9H2F9 335 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ACTL8Q9H568 366 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 INTS7Q9NVH2 962 aaKnown RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 INTS10Q9NVR2 710 aaKnown RBP11.96□□□□□ -0.5
SS18-225ENST00000585121 SPHK1Q9NYA1 384 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 ASIC3Q9UHC3 531 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 CRYL1Q9Y2S2 319 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 AP1M2Q9Y6Q5 423 aa11.96□□□□□ -0.5
SS18-225ENST00000585121 HELZ2Q9BYK8 2649 aaKnown RBP11.95□□□□□ -0.5
SS18-225ENST00000585121 J3QKU1 62 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 OR2B3O76000 313 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 S1PR4O95977 384 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 RAB40ALP0C0E4 278 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 TPBGLP0DKB5 382 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 AGXTP21549 392 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 CD9P21926 228 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 GPS2Q13227 327 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 CTSL3PQ5NE16 218 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 PCGF5Q86SE9 256 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 SYVN1Q86TM6 617 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 CILP2Q8IUL8 1156 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 LMNTD2Q8IXW0 634 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 DSELQ8IZU8 1212 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 OR2L8Q8NGY9 312 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 GABPB2Q8TAK5 448 aaPredicted RBP11.95□□□□□ -0.5
SS18-225ENST00000585121 C9orf43Q8TAL5 461 aaPredicted RBP11.95□□□□□ -0.5
SS18-225ENST00000585121 CALML6Q8TD86 181 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 LPGAT1Q92604 370 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 BIRC8Q96P09 236 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 C17orf62Q9BQA9 187 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 CHST8Q9H2A9 424 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 MAN2B2Q9Y2E5 1009 aa11.95□□□□□ -0.5
SS18-225ENST00000585121 GCN1Q92616 2671 aaKnown RBP11.94□□□□□ -0.5
SS18-225ENST00000585121 C9J4A7 227 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 MKRN2OSH3BPM6 223 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 RASGRF2O14827 1237 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 ZNF185O15231 689 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 ZNF749O43361 778 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 FKBP9O95302 570 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 PKMP14618 531 aaKnown RBP11.94□□□□□ -0.5
SS18-225ENST00000585121 ATP5DP30049 168 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 GNG11P61952 73 aa11.94□□□□□ -0.5
SS18-225ENST00000585121 SF1Q15637 639 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms