RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-223	ENST00000584760	BPHL	Q86WA6	291 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	DCUN1D3	Q8IWE4	304 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	UNC5B	Q8IZJ1	945 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	GALNT6	Q8NCL4	622 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF501	Q96CX3	271 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	SLC45A3	Q96JT2	553 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	TUBB2B	Q9BVA1	445 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF71	Q9NQZ8	489 aa	Predicted RBP	12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	SOHLH2	Q9NX45	425 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	OR6C2	Q9NZP2	312 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	ASIC3	Q9UHC3	531 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	LNPEP	Q9UIQ6	1025 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	PLAGL1	Q9UM63	463 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	MAN2B2	Q9Y2E5	1009 aa		12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	TDRKH	Q9Y2W6	561 aa	Known RBP	12.88	□□□□□ -0.35
SREBF1-223	ENST00000584760	BSN	Q9UPA5	3926 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	PIPSL	A2A3N6	862 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	CTAGE9	A4FU28	777 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	KPNA5	O15131	536 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	PVR	P15151	417 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	UGT2B7	P16662	529 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	PEBP1	P30086	187 aa	Known RBP	12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	CASR	P41180	1078 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	RAB28	P51157	221 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	KYNU	Q16719	465 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	C4orf17	Q53FE4	359 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF789	Q5FWF6	425 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	TMTC4	Q5T4D3	741 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	C6orf15	Q6UXA7	325 aa	Predicted RBP	12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	OTOA	Q7RTW8	1153 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	HOOK3	Q86VS8	718 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	STAMBPL1	Q96FJ0	436 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	TRAPPC9	Q96Q05	1148 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	OR2A14	Q96R47	310 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	LATS2	Q9NRM7	1088 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	KCND1	Q9NSA2	647 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	INTS10	Q9NVR2	710 aa	Known RBP	12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	SPHK1	Q9NYA1	384 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	CRYL1	Q9Y2S2	319 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	MAD1L1	Q9Y6D9	718 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	FLNC	Q14315	2725 aa		12.87	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZNF891	A8MT65	544 aa	Predicted RBP	12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760		H3BMM5	538 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	PFDN6	O15212	129 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	KDM1A	O60341	852 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	S1PR4	O95977	384 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	RPN2	P04844	631 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	F7	P08709	466 aa	Predicted RBP	12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	F8A1	P23610	371 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	ATP5D	P30049	168 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	FMO4	P31512	558 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	ABR	Q12979	859 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	PLEKHS1	Q5SXH7	462 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	IZUMO3	Q5VZ72	239 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	SYDE1	Q6ZW31	735 aa	Predicted RBP	12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	TRIM73	Q86UV7	250 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	DENND6A	Q8IWF6	608 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	KLHL7	Q8IXQ5	586 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	LINC01555	Q8NAE3	123 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	OR8K5	Q8NH50	307 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	STARD8	Q92502	1023 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	RUNDC3B	Q96NL0	473 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	EFHD1	Q9BUP0	239 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	KLHL25	Q9H0H3	589 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	TUBD1	Q9UJT1	453 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	ANAPC2	Q9UJX6	822 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	CROT	Q9UKG9	612 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	RUVBL2	Q9Y230	463 aa	Known RBP	12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	VPS9D1	Q9Y2B5	631 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	MED16	Q9Y2X0	877 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760	PCM1	Q15154	2024 aa		12.86	□□□□□ -0.35
SREBF1-223	ENST00000584760		A0A0J9YY10	115 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CLEC18A	A5D8T8	446 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CCDC188	H7C350	402 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	NKX2-8	O15522	239 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CPNE3	O75131	537 aa	Known RBP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	BANF1	O75531	89 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	MT-ND3	P03897	115 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	PKM	P14618	531 aa	Known RBP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	PGAM1	P18669	254 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	DLST	P36957	453 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	SLC1A2	P43004	574 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	DR1	Q01658	176 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	DHX9	Q08211	1270 aa	Known RBP	12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CDC20	Q12834	499 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CTBP1	Q13363	440 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CRYM	Q14894	314 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	KIR2DS3	Q14952	304 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	ZIC1	Q15915	447 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	LONRF1	Q17RB8	773 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	MSS51	Q4VC12	460 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CLEC18B	Q6UXF7	455 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	CDHR3	Q6ZTQ4	885 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	PCGF5	Q86SE9	256 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	LMNTD2	Q8IXW0	634 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	FAM26E	Q8N5C1	309 aa		12.85	□□□□□ -0.35
SREBF1-223	ENST00000584760	C19orf47	Q8N9M1	422 aa	Known RBP	12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms