RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 PLAGL1Q9UM63 463 aa13.56□□□□□ -0.24
CSNK1D-224ENST00000584672 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
CSNK1D-224ENST00000584672 MAP1AP78559 2803 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-224ENST00000584672 ACANP16112 2415 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 CPAMD8Q8IZJ3 1885 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 MYO1FO00160 1098 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 ZNHIT1O43257 154 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 CRYABP02511 175 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 CHRM5P08912 532 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 DRD2P14416 443 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 ACPPP15309 386 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 NFKB1P19838 968 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TNNT3P45378 269 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 PRLHRP49683 370 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 BOP1Q14137 746 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 SLC14A2Q15849 920 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 INAQ16352 499 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 KDELC1Q6UW63 502 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 APTXQ7Z2E3 356 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 IPMKQ8NFU5 416 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 OR5AR1Q8NGP9 310 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 FLVCR1-AS1Q8TAF5 88 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 DTX3LQ8TDB6 740 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 ADAMTS18Q8TE60 1221 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 PSMF1Q92530 271 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 NRGNQ92686 78 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TFGQ92734 400 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 NACC2Q96BF6 587 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TMUB1Q9BVT8 246 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TSPAN10Q9H1Z9 355 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 MVB12BQ9H7P6 319 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 EURLQ9NYK6 297 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 FKBPLQ9UIM3 349 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 CRLS1Q9UJA2 301 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 TDRKHQ9Y2W6 561 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 ARL5AQ9Y689 179 aa13.55□□□□□ -0.24
CSNK1D-224ENST00000584672 LOC285095A0A1B0GVY8 99 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 KLHL33A6NCF5 533 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 ISM1B1AKI9 464 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 FAM227AF5H4B4 570 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 MAP2K7O14733 419 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 HPP00738 406 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 PYGMP11217 842 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 MAGP20916 626 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 PTPN3P26045 913 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 PEBP1P30086 187 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 CD68P34810 354 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 SOX11P35716 441 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 PRKCIP41743 596 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 DYNLT1P63172 113 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 EEF1A2Q05639 463 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 SLC5A12Q1EHB4 618 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 TEX44Q53QW1 395 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 TFDP3Q5H9I0 405 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 ARHGEF18Q6ZSZ5 1173 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 KBTBD2Q8IY47 623 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 LMNTD1Q8N9Z9 388 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 OR4K2Q8NGD2 314 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 MAGED4Q96JG8 741 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 MRGPRX2Q96LB1 330 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 SPOCK3Q9BQ16 436 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 GSX1Q9H4S2 264 aaPredicted RBP13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 CUTCQ9NTM9 273 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 HACD3Q9P035 362 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 FAM153AQ9UHL3 310 aa13.54□□□□□ -0.24
CSNK1D-224ENST00000584672 LRRD1A4D1F6 860 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 DSCR3O14972 297 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 SRP72O76094 671 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 USP1O94782 785 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 WDPCPO95876 746 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 ALBP02768 609 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 CYP1A2P05177 515 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 PRR35P0CG20 571 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 RALBP11234 206 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 PIM1P11309 404 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 AGAP20933 346 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 KDELR1P24390 212 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 GCGRP47871 477 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 PDK1Q15118 436 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 SLC1A5Q15758 541 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 C3P1Q6ZMU1 363 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 MCATQ8IVS2 390 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 OXNAD1Q96HP4 312 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 VPS50Q96JG6 964 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 OLFM3Q96PB7 478 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 TMEM121Q9BTD3 319 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 AIPL1Q9NZN9 384 aa13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 PRRC2AP48634 2157 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-224ENST00000584672 NSG1A0A0A6YYJ2 146 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 APOL1O14791 398 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 PPP1R12AO14974 1030 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 FANCGO15287 622 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 SHMT2P34897 504 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 GRIA3P42263 894 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 NSG1P42857 185 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 ST13P50502 369 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 ARSFP54793 590 aa13.52□□□□□ -0.25
CSNK1D-224ENST00000584672 FANCCQ00597 558 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms