RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PKMP14618 531 aaKnown RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 PKLRP30613 574 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 PAFAH1B1P43034 410 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 PTGIRP43119 386 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 ADARP55265 1226 aaKnown RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 CDC20Q12834 499 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 KIR2DS3Q14952 304 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 LONRF1Q17RB8 773 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 IZUMO3Q5VZ72 239 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 BORAQ6PGQ7 559 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 CREG2Q8IUH2 290 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 AGGF1Q8N302 714 aaeCLIP19.74■□□□□ 0.75
SS18-224ENST00000584083 ZNF843Q8N446 348 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 C2orf73Q8N5S3 287 aaPredicted RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 EXD3Q8N9H8 876 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 CT55Q8WUE5 264 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 N4BP2L2Q92802 583 aaPredicted RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 SLCO2A1Q92959 643 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 FOPNLQ96NB1 174 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 CATSPER2Q96P56 530 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 INTS10Q9NVR2 710 aaKnown RBP19.74■□□□□ 0.75
SS18-224ENST00000584083 KCND3Q9UK17 655 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 SLC39A10Q9ULF5 831 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 PCDHB3Q9Y5E6 796 aa19.74■□□□□ 0.75
SS18-224ENST00000584083 KALRNO60229 2985 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 A0A0J9YY10 115 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 ZCWPW2A0A1B0GU75 182 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 S1PR4O95977 384 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CYP2A7P20853 494 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CD9P21926 228 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CTBP1Q13363 440 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 DNASE1L3Q13609 305 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 ZNF789Q5FWF6 425 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CNSTQ6PJW8 725 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CDHR3Q6ZTQ4 885 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 DENND6AQ8IWF6 608 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 C19orf47Q8N9M1 422 aaKnown RBP19.73■□□□□ 0.75
SS18-224ENST00000584083 OR1L3Q8NH93 324 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 MR1Q95460 341 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CLIP3Q96DZ5 547 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 TCTN2Q96GX1 697 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 IL17FQ96PD4 163 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 SLC7A5P2Q9GIP4 190 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 CCDC68Q9H2F9 335 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 FBXO6Q9NRD1 293 aaPredicted RBP19.73■□□□□ 0.75
SS18-224ENST00000584083 RUVBL2Q9Y230 463 aaKnown RBP19.73■□□□□ 0.75
SS18-224ENST00000584083 MRFAP1Q9Y605 127 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 NFS1Q9Y697 457 aa19.73■□□□□ 0.75
SS18-224ENST00000584083 COL6A6A6NMZ7 2263 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 KLK3P07288 261 aaPredicted RBP19.72■□□□□ 0.75
SS18-224ENST00000584083 MSL3P1P0C860 447 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 ITGA1P56199 1179 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 DR1Q01658 176 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 SLC5A12Q1EHB4 618 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 PRAMEF17Q5VTA0 474 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 FAM199XQ6PEV8 388 aaPredicted RBP19.72■□□□□ 0.75
SS18-224ENST00000584083 SYDE1Q6ZW31 735 aaPredicted RBP19.72■□□□□ 0.75
SS18-224ENST00000584083 TAX1BP1Q86VP1 789 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 ZBTB2Q8N680 514 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 LMNTD1Q8N9Z9 388 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.72■□□□□ 0.75
SS18-224ENST00000584083 FLVCR1-AS1Q8TAF5 88 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 CALML6Q8TD86 181 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 RAD51AP1Q96B01 352 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 RUNDC3BQ96NL0 473 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 AKIRIN1Q9H9L7 192 aaPredicted RBP19.72■□□□□ 0.75
SS18-224ENST00000584083 FAM60AQ9NP50 221 aa19.72■□□□□ 0.75
SS18-224ENST00000584083 C21orf140B9A014 251 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 TERTO14746 1132 aaKnown RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 RASGRF2O14827 1237 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 C1orf105O95561 183 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 F7P08709 466 aaPredicted RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 OAS2P29728 719 aaKnown RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 PEBP1P30086 187 aaKnown RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 CCR10P46092 362 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 BDKRB1P46663 353 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 GPS2Q13227 327 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 ERV3-1Q14264 604 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 GRB7Q14451 532 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 DEFB109BQ30KR1 87 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 ATP1A1-AS1Q5TC04 95 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 FAM20CQ8IXL6 584 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 LMNTD2Q8IXW0 634 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 GPR135Q8IZ08 494 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 RAB42Q8N4Z0 105 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 LINC01555Q8NAE3 123 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 SLC38A9Q8NBW4 561 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 OR2L8Q8NGY9 312 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 SLC22A18Q96BI1 424 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 MENTQ9BUN1 341 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 RAB11FIP5Q9BXF6 653 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 ACTR5Q9H9F9 607 aaPredicted RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.71■□□□□ 0.75
SS18-224ENST00000584083 GALPQ9UBC7 116 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 FAM169AQ9Y6X4 670 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 PCM1Q15154 2024 aa19.71■□□□□ 0.75
SS18-224ENST00000584083 SEC16AO15027 2179 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 E7EQ34 232 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 CCDC188H7C350 402 aa19.7■□□□□ 0.74
SS18-224ENST00000584083 BANF1O75531 89 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms