RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 PKP4Q99569 1192 aa15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 HIST1H2AJQ99878 128 aa15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 MRPL57Q9BQC6 102 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 H2AFJQ9BTM1 129 aa15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 MRPL46Q9H2W6 279 aaKnown RBP15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 CIDEBQ9UHD4 219 aa15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 PLAGL1Q9UM63 463 aa15.45■□□□□ 0.06
CSNK1D-212ENST00000580061 PCM1Q15154 2024 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 EME2A4GXA9 379 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 PABPN1LA6NDY0 278 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 RHPN2P1A8MT19 583 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 SYCE1LA8MT33 242 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 HMGB1P1B2RPK0 211 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 TARM1B6A8C7 271 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 PRPF4O43172 522 aaKnown RBP eCLIP15.44■□□□□ 0.068e-7■■□□□ 12.1
CSNK1D-212ENST00000580061 KDM1AO60341 852 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CBFA2T3O75081 653 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 LDOC1O95751 146 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 GUCA1CO95843 209 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 SBK3P0C264 359 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 PNLIPP16233 465 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CDKL1Q00532 357 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 NR1D2Q14995 579 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CCDC153Q494R4 210 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 GUSBP11Q6P575 273 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 MBOAT1Q6ZNC8 495 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 ZNF761Q86XN6 746 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 BAHD1Q8TBE0 780 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 TCP10LQ8TDR4 215 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 DENND1AQ8TEH3 1009 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 JPH3Q8WXH2 748 aaPredicted RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CCDC138Q96M89 665 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 SLC38A3Q99624 504 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 NRTNQ99748 197 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 IQCGQ9H095 443 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 C12orf65Q9H3J6 166 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 ARL15Q9NXU5 204 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 CPSF2Q9P2I0 782 aaKnown RBP15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 ICKQ9UPZ9 632 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 PLLPQ9Y342 182 aa15.44■□□□□ 0.06
CSNK1D-212ENST00000580061 RP1P56715 2156 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 FAM186AA6NE01 2351 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 RIF1Q5UIP0 2472 aaKnown RBP15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 LILRA5A6NI73 299 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 UBXN8O00124 270 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 PLIN3O60664 434 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 SLC16A8O95907 504 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 PROCP04070 461 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 ANXA5P08758 320 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 ERGP11308 486 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 MTHFD2P13995 350 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 RPA3P35244 121 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 RAB28P51157 221 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 DUSP3P51452 185 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 DAB2P98082 770 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 PLCL1Q15111 1095 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 CDKL4Q5MAI5 379 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 PIP4P1Q86T03 277 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 PDPRQ8NCN5 879 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 NAT6Q93015 286 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 EXT2Q93063 718 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 IL17FQ96PD4 163 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 TBC1D10AQ9BXI6 508 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 EVA1BQ9NVM1 165 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 NUDT4Q9NZJ9 180 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 SPATA7Q9P0W8 599 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 STOX2Q9P2F5 926 aaPredicted RBP15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 FTSJ1Q9UET6 329 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 ASXL3Q9C0F0 2248 aa15.43■□□□□ 0.06
CSNK1D-212ENST00000580061 CPED1A4D0V7 1026 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 FAM221BA6H8Z2 402 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 NCF1BA6NI72 391 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 NCF1CA8MVU1 366 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 SUPT3HB4E1H0 165 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 KLK8O60259 260 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 SUPT3HO75486 399 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 NCF1P14598 390 aaPredicted RBP15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 CKMT2P17540 419 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 IMPA1P29218 277 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 PKLRP30613 574 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 SHMT2P34897 504 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 GPR3P46089 330 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 EPHA4P54764 986 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 ARHGAP19Q14CB8 494 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 CYP2A13Q16696 494 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 EFL1Q7Z2Z2 1120 aaKnown RBP15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 AMIGO1Q86WK6 493 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 KIAA2013Q8IYS2 634 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 RAB42Q8N4Z0 105 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 OR4E2Q8NGC2 313 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 HMGCLL1Q8TB92 370 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 ZNF480Q8WV37 535 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 LCN9Q8WX39 176 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 CCDC74AQ96AQ1 378 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 RHBDF1Q96CC6 855 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 FBXL8Q96CD0 374 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 FAM111AQ96PZ2 611 aa15.42■□□□□ 0.06
CSNK1D-212ENST00000580061 EGFL8Q99944 293 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms