RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 PATE1Q8WXA2 126 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 FBXL8Q96CD0 374 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 NRTNQ99748 197 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 GSTO2Q9H4Y5 243 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 ZNF624Q9P2J8 865 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 ZNF318Q5VUA4 2279 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 PATE3B3GLJ2 98 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 AQP9O43315 295 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 SNNO75324 88 aaPredicted RBP23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 PIAS2O75928 621 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 RPS17P08708 135 aaKnown RBP23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 TSPAN8P19075 237 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 DRD4P21917 467 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 HNMTP50135 292 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 ABCE1P61221 599 aaKnown RBP23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 RCN2Q14257 317 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 DUOXA1Q1HG43 343 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 LRRC34Q8IZ02 419 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 TCAIMQ8N3R3 496 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 UBTD2Q8WUN7 234 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 RAD51AP1Q96B01 352 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 CD244Q9BZW8 370 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 DRC3Q9H069 523 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 ATG10Q9H0Y0 220 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 UCKL1Q9NWZ5 548 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 PCTPQ9UKL6 214 aa23.37■■□□□ 1.33
ATPAF1-213ENST00000574428 VPS13AQ96RL7 3174 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 TMEM131Q92545 1883 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 TMEM114B3SHH9 223 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 CHRNGP07510 517 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 IMPA1P29218 277 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 CDH13P55290 713 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 GRIK2Q13002 908 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 PCBP2Q15366 365 aaKnown RBP eCLIP23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 IYDQ6PHW0 289 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 AGTRAPQ6RW13 159 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 FRMD7Q6ZUT3 714 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 GKN2Q86XP6 184 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 LMNTD1Q8N9Z9 388 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 PPFIBP2Q8ND30 876 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 PPP4R1Q8TF05 950 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 PYCR2Q96C36 320 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 CXorf40BQ96DE9 158 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 IL17FQ96PD4 163 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 ELF4Q99607 663 aaPredicted RBP23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 MVB12BQ9H7P6 319 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 FGFR1OP2Q9NVK5 253 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 TNPO3Q9Y5L0 923 aaKnown RBP23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 HEBP2Q9Y5Z4 205 aa23.36■■□□□ 1.33
ATPAF1-213ENST00000574428 B4DGG1 531 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 E2F3O00716 465 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 YY2O15391 372 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 NPHS1O60500 1241 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 CCNT2O60583 730 aaKnown RBP23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 HSPA4LO95757 839 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 HNRNPH2P55795 449 aaKnown RBP23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 OCRLQ01968 901 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ARL13AQ5H913 290 aaPredicted RBP23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ANKS6Q68DC2 871 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ZNF483Q8TF39 744 aaPredicted RBP23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ZNF480Q8WV37 535 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 CAMK1GQ96NX5 476 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 C1QTNF3Q9BXJ4 246 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 PITPNM3Q9BZ71 974 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 SHCBP1LQ9BZQ2 653 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 THAP1Q9NVV9 213 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 DOLKQ9UPQ8 538 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 GGT5P36269 586 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 SLC19A1P41440 591 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 DPP6P42658 865 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 SHBQ15464 509 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 PTCHD3Q3KNS1 767 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 LSMEM2Q8N112 164 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 NAGSQ8N159 534 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 CEP76Q8TAP6 659 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ZDHHC1Q8WTX9 485 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 ATL1Q8WXF7 558 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 CNDP1Q96KN2 507 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 SORT1Q99523 831 aa23.35■■□□□ 1.33
ATPAF1-213ENST00000574428 LAMA1P25391 3075 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 DNAH14Q0VDD8 3507 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 STK16O75716 305 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 SLC6A12P48065 614 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 CCDC6Q16204 474 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 DEFB133Q30KQ1 61 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 TRIM61Q5EBN2 209 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 RABEPKQ7Z6M1 372 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 SYTL1Q8IYJ3 562 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 MED8Q96G25 268 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 CAPN10Q9HC96 672 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 SEMA4BQ9NPR2 832 aaPredicted RBP23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 OPTCQ9UBM4 332 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 POLG2Q9UHN1 485 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 COLEC10Q9Y6Z7 277 aa23.34■■□□□ 1.33
ATPAF1-213ENST00000574428 CACNA1EQ15878 2313 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 LMO7DNF2Z398 122 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 EDF1O60869 148 aaKnown RBP23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 ARRB1P49407 418 aaPredicted RBP23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 BNIP3Q12983 259 aa23.33■■□□□ 1.33
ATPAF1-213ENST00000574428 NAE1Q13564 534 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms