RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 ANKRD34CP0C6C1 535 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 JMJD7P0C870 316 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 PLA2G2AP14555 144 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 POLR2CP19387 275 aaPredicted RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 FDXRP22570 491 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 MPSTP25325 297 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 RBMS1P29558 406 aaKnown RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 ECHS1P30084 290 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SLC12A2P55011 1212 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 IL2P60568 153 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 GABREP78334 506 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 POU4F1Q01851 419 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 KBTBD12Q3ZCT8 623 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 C3orf38Q5JPI3 329 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SNAP47Q5SQN1 464 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 RBM20Q5T481 1227 aaKnown RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 CACHD1Q5VU97 1274 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CYB5D1Q6P9G0 228 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 IGF2-ASQ6U949 168 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 GPR155Q7Z3F1 870 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 PRSS42Q7Z5A4 293 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 ARHGAP22Q7Z5H3 698 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CPNE9Q8IYJ1 553 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 MYO1HQ8N1T3 1032 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 JPH3Q8WXH2 748 aaPredicted RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 RSC1A1Q92681 617 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SLC22A18Q96BI1 424 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 TSPAN17Q96FV3 270 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CYTH2Q99418 400 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SLC30A3Q99726 388 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 CDC42EP4Q9H3Q1 356 aaKnown RBP10.7□□□□□ -0.7
CHD3-216ENST00000573936 PRORYQ9H606 182 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 POPDC3Q9HBV1 291 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SYTL2Q9HCH5 934 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SMYD2Q9NRG4 433 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 NINJ2Q9NZG7 142 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 TMEM9Q9P0T7 183 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SLC17A6Q9P2U8 582 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 LNPEPQ9UIQ6 1025 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 SATB2Q9UPW6 733 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 LOXL2Q9Y4K0 774 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 PSAT1Q9Y617 370 aa10.7□□□□□ -0.7
CHD3-216ENST00000573936 TEX51A0A1B0GUA7 166 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 PIPSLA2A3N6 862 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 GSAPA4D1B5 854 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 TLCD2A6NGC4 264 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 ZNF839A8K0R7 811 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 A8MU76 341 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 CXorf49A8MYA2 514 aaPredicted RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 BTN3A1O00481 513 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 RASGRF2O14827 1237 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 MAP3K7O43318 606 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 TLX3O43711 291 aaPredicted RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 PSIP1O75475 530 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 RASSF9O75901 435 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 DXOO77932 396 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 C8GP07360 202 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 MCM3P25205 808 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 MAP4P27816 1152 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 TNFRSF8P28908 595 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 HSD17B2P37059 387 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 RAB28P51157 221 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 CDKN2DP55273 166 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 GFERP55789 205 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 VSNL1P62760 191 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 TIAL1Q01085 375 aaKnown RBP eCLIP10.69□□□□□ -0.7
CHD3-216ENST00000573936 KIR2DS3Q14952 304 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 TAF1BQ53T94 588 aaPredicted RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 PAQR3Q6TCH7 311 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 CYHR1Q6ZMK1 362 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 TRMT10CQ7L0Y3 403 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 KMT5CQ86Y97 462 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 NKAPQ8N5F7 415 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 PPM1NQ8N819 430 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 FBXO15Q8NCQ5 510 aaPredicted RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 RCBTB1Q8NDN9 531 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 OR9A1PQ8NGU1 263 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 GIMAP7Q8NHV1 300 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 ASB11Q8WXH4 323 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 FGF11Q92914 225 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 RBBP8Q99708 897 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 MCMBPQ9BTE3 642 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 FUT8Q9BYC5 575 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 B3GNT4Q9C0J1 378 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 ZNF768Q9H5H4 540 aaKnown RBP10.69□□□□□ -0.7
CHD3-216ENST00000573936 XKR8Q9H6D3 395 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 C1GALT1Q9NS00 363 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 SPATA7Q9P0W8 599 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 SEMA5BQ9P283 1151 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 KLHL3Q9UH77 587 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 ICKQ9UPZ9 632 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 NFS1Q9Y697 457 aa10.69□□□□□ -0.7
CHD3-216ENST00000573936 A0A087WUV0 522 aaPredicted RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 PABPN1LA6NDY0 278 aaKnown RBP10.68□□□□□ -0.7
CHD3-216ENST00000573936 B4E171 279 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 GFYI3L273 518 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 J3QKU1 62 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 BTN3A3O00478 584 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 SLC16A5O15375 505 aa10.68□□□□□ -0.7
CHD3-216ENST00000573936 MPOP05164 745 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms