RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 KCNA10Q16322 511 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 CES5AQ6NT32 575 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 NCEH1Q6PIU2 408 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 PIK3C3Q8NEB9 887 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 LKAAEAR1Q8TD35 194 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 AKIP1Q9NQ31 210 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 C1orf109Q9NX04 203 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ERVK-18Q9QC07 812 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 PCDHGB1Q9Y5G3 927 aa15.3■□□□□ 0.04
NUP88-207ENST00000573584 ERN1O75460 977 aaKnown RBP15.29■□□□□ 0.04
NUP88-207ENST00000573584 GABARAPO95166 117 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 MYCLP1P12525 358 aaPredicted RBP15.29■□□□□ 0.04
NUP88-207ENST00000573584 CYBAP13498 195 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 HPCAL1P37235 193 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 PHC1P78364 1004 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 IL1RL1Q01638 556 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 SIM2Q14190 667 aaPredicted RBP15.29■□□□□ 0.04
NUP88-207ENST00000573584 CALHM3Q86XJ0 350 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 ZFP90Q8TF47 636 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 FBLIM1Q8WUP2 373 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 ZNF566Q969W8 418 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 VMP1Q96GC9 406 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 INTS6Q9UL03 887 aaKnown RBP15.29■□□□□ 0.04
NUP88-207ENST00000573584 CHD5Q8TDI0 1954 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 TMEM247A6NEH6 219 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 SLC38A8A6NNN8 435 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 M0QX08 132 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 MANBAO00462 879 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 PRAMEF1O95521 474 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 CD160O95971 181 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 KLKB1P03952 638 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 ALPIP09923 528 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 DGKAP23743 735 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 FMO3P31513 532 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 LAPTM4AQ15012 233 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 ADPRMQ3LIE5 342 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 USP39Q53GS9 565 aaKnown RBP15.29■□□□□ 0.04
NUP88-207ENST00000573584 CHPFQ8IZ52 775 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 GLMNQ92990 594 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 TMEM165Q9HC07 324 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 ATAD3AQ9NVI7 634 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 AASSQ9UDR5 926 aa15.29■□□□□ 0.04
NUP88-207ENST00000573584 SLC22A1O15245 554 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 WDR47O94967 919 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 EBLN1P0CF75 366 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 CYP4B1P13584 511 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 EPB42P16452 691 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 IL1RNP18510 177 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 MAP2K4P45985 399 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 GZMMP51124 257 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ACOX1Q15067 660 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 NPTX1Q15818 432 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 CPZQ66K79 652 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 SHQ1Q6PI26 577 aaKnown RBP15.28■□□□□ 0.04
NUP88-207ENST00000573584 NCCRP1Q6ZVX7 275 aaPredicted RBP15.28■□□□□ 0.04
NUP88-207ENST00000573584 CYP4Z1Q86W10 505 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ANKRD46Q86W74 232 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 SNX29P2Q8IUI4 249 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ZDHHC21Q8IVQ6 265 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 SETD9Q8NE22 299 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 NDNFQ8TB73 568 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 S100ZQ8WXG8 99 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ITPKCQ96DU7 683 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 CEP295NLQ96MC4 621 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 CPPED1Q9BRF8 314 aaPredicted RBP15.28■□□□□ 0.04
NUP88-207ENST00000573584 RIBC2Q9H4K1 309 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 PARVBQ9HBI1 364 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 GKN1Q9NS71 199 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 VNN3Q9NY84 501 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 PRSS21Q9Y6M0 314 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 A0A1B0GVM2 712 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 PER2O15055 1255 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ITGAMP11215 1152 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 CA5AP35218 305 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 HUNKP57058 714 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 B3GNT8Q7Z7M8 397 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 PLPP6Q8IY26 295 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 TMEM132CQ8N3T6 1108 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 BARD1Q99728 777 aaKnown RBP15.28■□□□□ 0.04
NUP88-207ENST00000573584 NTMT1Q9BV86 223 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 KCNH6Q9H252 994 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ASB8Q9H765 288 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 ASIC5Q9NY37 505 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 TRPS1Q9UHF7 1281 aa15.28■□□□□ 0.04
NUP88-207ENST00000573584 NADKO95544 446 aaPredicted RBP15.27■□□□□ 0.04
NUP88-207ENST00000573584 ALDH4A1P30038 563 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 CORO1AP31146 461 aaKnown RBP15.27■□□□□ 0.04
NUP88-207ENST00000573584 S100A3P33764 101 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 HALP42357 657 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 CD300CQ08708 224 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 GTF2H3Q13889 308 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 CPSF6Q16630 551 aaKnown RBP eCLIP15.27■□□□□ 0.04
NUP88-207ENST00000573584 TRIM71Q2Q1W2 868 aaKnown RBP15.27■□□□□ 0.04
NUP88-207ENST00000573584 FAM26DQ5JW98 314 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 RBFAQ8N0V3 343 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 DNAJB8Q8NHS0 232 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 LINC01599Q8WXQ3 324 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 CDK5RAP1Q96SZ6 601 aaKnown RBP15.27■□□□□ 0.04
NUP88-207ENST00000573584 INPP5KQ9BT40 448 aa15.27■□□□□ 0.04
NUP88-207ENST00000573584 SERHLQ9NQF3 203 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms