RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 AGBL5Q8NDL9 886 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 FBF1Q8TES7 1133 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CDKL2Q92772 493 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 INPP5DQ92835 1189 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 PMEPA1Q969W9 287 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 ZDHHC12Q96GR4 267 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 ELMO2Q96JJ3 720 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 PPM1MQ96MI6 270 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 IL17FQ96PD4 163 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 RAB33BQ9H082 229 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CDC42EP4Q9H3Q1 356 aaKnown RBP15.33■□□□□ 0.04
CHD3-215ENST00000572750 ASCL3Q9NQ33 180 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 NSMCE4AQ9NXX6 385 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 TAS2R13Q9NYV9 303 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 NINJ2Q9NZG7 142 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 AKAP7Q9P0M2 348 aaPredicted RBP15.33■□□□□ 0.04
CHD3-215ENST00000572750 EPHA6Q9UF33 1036 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 POLG2Q9UHN1 485 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 CORO1CQ9ULV4 474 aaPredicted RBP15.33■□□□□ 0.04
CHD3-215ENST00000572750 NFU1Q9UMS0 254 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 DHRS7Q9Y394 339 aa15.33■□□□□ 0.04
CHD3-215ENST00000572750 SNRNP200O75643 2136 aaKnown RBP15.32■□□□□ 0.04
CHD3-215ENST00000572750 FAM95CA0A1B0GW59 222 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 EFCAB7A8K855 629 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 ARHGEF33A8MVX0 844 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 SPAG6O75602 509 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 MATN4O95460 622 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 C1orf105O95561 183 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 ANKRD34CP0C6C1 535 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 SAT1P21673 171 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 FDXRP22570 491 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 PKLRP30613 574 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 KPNA2P52292 529 aaKnown RBP15.32■□□□□ 0.04
CHD3-215ENST00000572750 MAPK10P53779 464 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 PRKAA1Q13131 559 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 ZNF460Q14592 562 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 KYNUQ16719 465 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.32■□□□□ 0.04
CHD3-215ENST00000572750 CACHD1Q5VU97 1274 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 FAM45BPQ6NSW5 357 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 TAX1BP1Q86VP1 789 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 IFT20Q8IY31 132 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 GSPT2Q8IYD1 628 aaKnown RBP15.32■□□□□ 0.04
CHD3-215ENST00000572750 ADGRF3Q8IZF5 1079 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 FAM45AQ8TCE6 357 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 VPS39Q96JC1 886 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 FOPNLQ96NB1 174 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 MAP3K3Q99759 626 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 MCMBPQ9BTE3 642 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 MENTQ9BUN1 341 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 RHOJQ9H4E5 214 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 OCIAD1Q9NX40 245 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 KLHL42Q9P2K6 505 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 POMT2Q9UKY4 750 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 PTPRQQ9UMZ3 2332 aa15.32■□□□□ 0.04
CHD3-215ENST00000572750 IGHV5-51A0A0C4DH38 117 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 TLCD2A6NGC4 264 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 DXOO77932 396 aaKnown RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 ACSL3O95573 720 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 ITGA2BP08514 1039 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 FGF3P11487 239 aaPredicted RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 ENO3P13929 434 aaPredicted RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 RBMS1P29558 406 aaKnown RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 DEKP35659 375 aaKnown RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 RAB28P51157 221 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 PDAP1Q13442 181 aaKnown RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 TBC1D25Q3MII6 688 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 UGT3A1Q6NUS8 523 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 PAQR3Q6TCH7 311 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 PCSK4Q6UW60 755 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 CEP128Q6ZU80 1094 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 C2orf73Q8N5S3 287 aaPredicted RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 PPM1NQ8N819 430 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 LINC01555Q8NAE3 123 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 LINGO1Q96FE5 620 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 CPNE1Q99829 537 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 ZNF768Q9H5H4 540 aaKnown RBP15.31■□□□□ 0.04
CHD3-215ENST00000572750 SPHK1Q9NYA1 384 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 ACTR10Q9NZ32 417 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 TXNDC16Q9P2K2 825 aa15.31■□□□□ 0.04
CHD3-215ENST00000572750 PYCARD-AS1I3L0S3 204 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 J3QKU1 62 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 MATN2O00339 956 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 RASGRF2O14827 1237 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 TLX3O43711 291 aaPredicted RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 KDM1AO60341 852 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 PSIP1O75475 530 aaKnown RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 FAM155BO75949 473 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 UBR5O95071 2799 aaPredicted RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 CHRM5P08912 532 aaPredicted RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 CBSLP0DN79 551 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 ITPKBP27987 946 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 PEBP1P30086 187 aaKnown RBP15.3■□□□□ 0.04
CHD3-215ENST00000572750 CBSP35520 551 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 CCNFP41002 786 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 SH3BP2P78314 561 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 KCNAB1Q14722 419 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 IGF2-ASQ6U949 168 aa15.3■□□□□ 0.04
CHD3-215ENST00000572750 NEK10Q6ZWH5 1172 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms