RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 MBD3O95983 291 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 F9P00740 461 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 MCF2P10911 925 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ACADMP11310 421 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 RARGP13631 454 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 CYP11B2P19099 503 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TYMPP19971 482 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 BDNFP23560 247 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TACR3P29371 465 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 GJC1P36383 396 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 GDF5P43026 501 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 GTF2A1P52655 376 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 UCNP55089 124 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 C21orf59P57076 290 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 RPP30P78346 268 aaKnown RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 CBX1P83916 185 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 GAD2Q05329 585 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ST3GAL1Q11201 340 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 SH2D4BQ5SQS7 431 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 PRAMEF17Q5VTA0 474 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 FCRLBQ6BAA4 426 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 GJB7Q6PEY0 223 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 SLC30A9Q6PML9 568 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 CCDC91Q7Z6B0 441 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NEK8Q86SG6 692 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 VASH2Q86V25 355 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 UEVLDQ8IX04 471 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 KRT222Q8N1A0 295 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 PNLDC1Q8NA58 520 aaKnown RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 MCPH1Q8NEM0 835 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ENGASEQ8NFI3 743 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 SPPL2BQ8TCT7 592 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 SAP25Q8TEE9 199 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 SCFD1Q8WVM8 642 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NCSTNQ92542 709 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ELP4Q96EB1 424 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF578Q96N58 590 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NUP58Q9BVL2 599 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TM2D2Q9BX73 214 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 NPLQ9BXD5 320 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 INTS2Q9H0H0 1204 aaKnown RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 PCED1AQ9H1Q7 454 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TMEM206Q9H813 350 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 EBF2Q9HAK2 575 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ASCL3Q9NQ33 180 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ZNF71Q9NQZ8 489 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 TMEM248Q9NWD8 314 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 BEX4Q9NWD9 120 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 IRAK4Q9NWZ3 460 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 PPP1R14DQ9NXH3 145 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ALKBH4Q9NXW9 302 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 ING1Q9UK53 422 aaPredicted RBP5.4□□□□□ -1.54
SF3B3-214ENST00000572365 PCDHGA1Q9Y5H4 931 aa5.4□□□□□ -1.54
SF3B3-214ENST00000572365 HIVEP1P15822 2718 aa5.4□□□□□ -1.55
SF3B3-214ENST00000572365 CSMD2Q7Z408 3487 aa5.4□□□□□ -1.55
SF3B3-214ENST00000572365 PCNX1Q96RV3 2341 aa5.4□□□□□ -1.55
SF3B3-214ENST00000572365 ARHGEF17Q96PE2 2063 aaPredicted RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TNRC6AQ8NDV7 1962 aaKnown RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 A0A087X0M5 115 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 A0A1B0GX30 115 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TTC26A0AVF1 554 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CLEC18AA5D8T8 446 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 GAGE10A6NGK3 116 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CYR61O00622 381 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 RTN2O75298 545 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 RTN3O95197 1032 aaPredicted RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 LYPLA2O95372 231 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 NEFHP12036 1026 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TYK2P29597 1187 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 USP8P40818 1118 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 UQCRFS1P47985 274 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 MTNR1AP48039 350 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 PGFP49763 221 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 EFNA5P52803 228 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TUBA4AP68366 448 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TAF10Q12962 218 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 PDIA5Q14554 519 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CALCRLQ16602 461 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF766Q5HY98 468 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CLEC18BQ6UXF7 455 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 H1FNTQ75WM6 255 aaPredicted RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 RNF144BQ7Z419 303 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 TRMT11Q7Z4G4 463 aaKnown RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 ADGRG6Q86SQ4 1221 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 DCP1BQ8IZD4 617 aaKnown RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CLEC18CQ8NCF0 446 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 CADM4Q8NFZ8 388 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 PRCCQ92733 491 aaPredicted RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 ATXN7L3BQ96GX2 97 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 ADAD1Q96M93 576 aaKnown RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 MTMR9Q96QG7 549 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 GABRG3Q99928 467 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 BBS2Q9BXC9 721 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 MLXIPLQ9NP71 852 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 SPHK2Q9NRA0 654 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 HCN3Q9P1Z3 774 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 SEL1LQ9UBV2 794 aa5.39□□□□□ -1.55
SF3B3-214ENST00000572365 UBQLN1Q9UMX0 589 aaKnown RBP5.39□□□□□ -1.55
SF3B3-214ENST00000572365 OSGIN2Q9Y236 505 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms