RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 ZNF385CQ66K41 422 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 DUPD1Q68J44 220 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 NEPROQ6NW34 567 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 INO80CQ6PI98 192 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 ZNF517Q6ZMY9 492 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 UNC5AQ6ZN44 842 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 VASH2Q86V25 355 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 LRRC6Q86X45 466 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TBC1D21Q8IYX1 336 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 CARFQ8N187 725 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 C2CD4AQ8NCU7 369 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 CD200R1Q8TD46 325 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TTC9Q92623 222 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMG6-210ENST00000572205 ZNF501Q96CX3 271 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 RNF31Q96EP0 1072 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 STAMBPL1Q96FJ0 436 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 AHCYL2Q96HN2 611 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 OR2A14Q96R47 310 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TAAR9Q96RI9 348 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TCF12Q99081 682 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 KRT12Q99456 494 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 CD180Q99467 661 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 VPS37BQ9H9H4 285 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 FBXO6Q9NRD1 293 aaPredicted RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 SMYD2Q9NRG4 433 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 ENAMQ9NRM1 1142 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 INTS10Q9NVR2 710 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 GNPTGQ9UJJ9 305 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 PLAGL1Q9UM63 463 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 HEBP2Q9Y5Z4 205 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 PSAT1Q9Y617 370 aa8.41□□□□□ -1.06
SMG6-210ENST00000572205 TNRC6AQ8NDV7 1962 aaKnown RBP8.41□□□□□ -1.06
SMG6-210ENST00000572205 MED13Q9UHV7 2174 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 ARHGEF33A8MVX0 844 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 ERVH48-1M5A8F1 160 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 KLK10O43240 276 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 C1QL1O75973 258 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 C1orf105O95561 183 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PKMP14618 531 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 PVRP15151 417 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 UGT2B7P16662 529 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 POLR2CP19387 275 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 F8A1P23610 371 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CD82P27701 267 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 NDUFS1P28331 727 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PRDX3P30048 256 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 ECHS1P30084 290 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CSTF2P33240 577 aaKnown RBP eCLIP8.4□□□□□ -1.06
SMG6-210ENST00000572205 ELK3P41970 407 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 BDKRB1P46663 353 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 SEPHS1P49903 392 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PGGT1BP53609 377 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CSE1LP55060 971 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 YBX1P67809 324 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 HSPA14Q0VDF9 509 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PRKG2Q13237 762 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PLCL1Q15111 1095 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 LONRF1Q17RB8 773 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 ZXDCQ2QGD7 858 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 SOWAHCQ53LP3 525 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 HSP90AA5PQ58FG0 334 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 DNAJC21Q5F1R6 531 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 ACSBG2Q5FVE4 666 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 PLEKHS1Q5SXH7 462 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 RBM20Q5T481 1227 aaKnown RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 RNF187Q5TA31 235 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 CACHD1Q5VU97 1274 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 MRNIPQ6NTE8 343 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 IRGCQ6NXR0 463 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CNSTQ6PJW8 725 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 UNC5DQ6UXZ4 953 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CYHR1Q6ZMK1 362 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 GALNT7Q86SF2 657 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 TRIM73Q86UV7 250 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 KCNMB4Q86W47 210 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 OOSP2Q86WS3 158 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 FAM129CQ86XR2 697 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 LRRC56Q8IYG6 542 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 SLC38A9Q8NBW4 561 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 OR4E2Q8NGC2 313 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 HMGCLL1Q8TB92 370 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 UBXN4Q92575 508 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 DLG3Q92796 817 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 KCNJ9Q92806 393 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 FAM136AQ96C01 138 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CERS2Q96G23 380 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 SNF8Q96H20 258 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 C16orf45Q96MC5 204 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 IL17FQ96PD4 163 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 TRAPPC9Q96Q05 1148 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 TSPAN10Q9H1Z9 355 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 AKIRIN1Q9H9L7 192 aaPredicted RBP8.4□□□□□ -1.06
SMG6-210ENST00000572205 FAM60AQ9NP50 221 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 HRASLS2Q9NWW9 162 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 SLC39A1Q9NY26 324 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 MOCS1Q9NZB8 636 aa8.4□□□□□ -1.06
SMG6-210ENST00000572205 CIDEBQ9UHD4 219 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms