RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SMCO2A6NFE2 343 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 FAM90A20PA6NIJ5 464 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 AGAP14A8MT82 685 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 A8MXE2 369 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 HNRNPCL2B2RXH8 293 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PTGES3LE9PB15 166 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SGK1O00141 431 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 VILLO15195 856 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 CTAGE5O15320 804 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 LINC01565O15544 149 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RIPK2O43353 540 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 HNRNPCL1O60812 293 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 RTN2O75298 545 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ZNF432O94892 652 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PLEKHA8P1O95397 391 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PPP1R3DO95685 299 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ASGR1P07306 291 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 GCFC2P16383 781 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 GNL1P36915 607 aaPredicted RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 PSMB10P40306 273 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 AARSP49588 968 aaKnown RBP eCLIP3.53□□□□□ -1.84
CDC27-213ENST00000571643 PEX5P50542 639 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PNLIPRP1P54315 467 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 NAPAP54920 295 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SNAP25P60880 206 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ECT2LQ008S8 904 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ORC2Q13416 577 aaPredicted RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 LASP1Q14847 261 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 SMU1Q2TAY7 513 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 KBTBD12Q3ZCT8 623 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 CELF3Q5SZQ8 465 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 CCDC122Q5T0U0 273 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 GFI1BQ5VTD9 330 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ATG9BQ674R7 924 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SHQ1Q6PI26 577 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 CYP20A1Q6UW02 462 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 METTL7BQ6UX53 244 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 GBP6Q6ZN66 633 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PIWIL3Q7Z3Z3 882 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 CPLX4Q7Z7G2 160 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 DIS3L2Q8IYB7 885 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 POMGNT2Q8NAT1 580 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RDM1Q8NG50 284 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RASSF8Q8NHQ8 419 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 CRYGNQ8WXF5 182 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 GTF3C6Q969F1 213 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 OTULINQ96BN8 352 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RNF125Q96EQ8 232 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 TXNDC15Q96J42 360 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 AK8Q96MA6 479 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 FAM20AQ96MK3 541 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RIT2Q99578 217 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SLC25A33Q9BSK2 321 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 MTG1Q9BT17 334 aaPredicted RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 THUMPD3Q9BV44 507 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 CCDC94Q9BW85 323 aaPredicted RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 FUT8Q9BYC5 575 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 LRRC2Q9BYS8 371 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 CPVLQ9H3G5 476 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 DDX31Q9H8H2 851 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 NOD2Q9HC29 1040 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 MID1IP1Q9NPA3 183 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PFDN4Q9NQP4 134 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SNTG1Q9NSN8 517 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SEPT11Q9NVA2 429 aaKnown RBP3.53□□□□□ -1.84
CDC27-213ENST00000571643 COX16Q9P0S2 106 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ACTR3BQ9P1U1 418 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 ANAPC5Q9UJX4 755 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 CAMK2AQ9UQM7 478 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 RCE1Q9Y256 329 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 TMED5Q9Y3A6 229 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 PAM16Q9Y3D7 125 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 UBIAD1Q9Y5Z9 338 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SESN1Q9Y6P5 492 aa3.53□□□□□ -1.84
CDC27-213ENST00000571643 SCN10AQ9Y5Y9 1956 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 TNRC18O15417 2968 aaPredicted RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 A0A0G2JPF8 293 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 RNF103-CHMP3A0A140T963 221 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 LINC00854A0A1B0GVQ3 168 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 CTAGE9A4FU28 777 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 HMX3A6NHT5 357 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 KDM4EB2RXH2 506 aaPredicted RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 HNRNPCL3B7ZW38 293 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 HAS3O00219 553 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 RNF103O00237 685 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 PGRMC2O15173 223 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 POLR3GO15318 223 aaPredicted RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 IPO7O95373 1038 aaKnown RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 ZBTB11O95625 1053 aaPredicted RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 PGK1P00558 417 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 TK1P04183 234 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 CLEC3BP05452 202 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 HNRNPCL4P0DMR1 293 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 ACP5P13686 325 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 MYF6P23409 242 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 NFKBIAP25963 317 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 HOXA13P31271 388 aaPredicted RBP3.52□□□□□ -1.85
CDC27-213ENST00000571643 SFNP31947 248 aa3.52□□□□□ -1.85
CDC27-213ENST00000571643 RDXP35241 583 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms