RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 FAM157AC9JC47 383 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CLIC1O00299 241 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SLC33A1O00400 549 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 OGG1O15527 345 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SLC37A4O43826 429 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NOBOXO60393 691 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TSPAN1O60635 241 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RFPL2O75678 378 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NCR1O76036 304 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ERLIN2O94905 339 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 LYPLA2O95372 231 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DEXIO95424 95 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 GBAP04062 536 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 HIST1H2ABP04908 130 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DCNP07585 359 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PCNAP12004 261 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 APEHP13798 732 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 GCFC2P16383 781 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 JUNBP17275 347 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ANXA7P20073 488 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 HIST1H2ADP20671 130 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DRD4P21917 467 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ITGB7P26010 798 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PSMA5P28066 241 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ACADLP28330 430 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 HOXA9P31269 272 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RYKP34925 604 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 HSPA4P34932 840 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MATR3P43243 847 aaKnown RBP eCLIP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RPS9P46781 194 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 OR1G1P47890 313 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SCNN1GP51170 649 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ARSEP51690 589 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 COPB1P53618 953 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 LIMK1P53667 647 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 UBASH3AP57075 661 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TAS2R40P59535 323 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PTENP60484 403 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 YPEL5P62699 121 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ASIC1P78348 528 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ARF5P84085 180 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ECT2LQ008S8 904 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NCBP1Q09161 790 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NPRL3Q12980 569 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 GRIK3Q13003 919 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TFDP1Q14186 410 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MXD4Q14582 209 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MFSD13AQ14CX5 517 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 EMC2Q15006 297 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PTPRRQ15256 657 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DLG2Q15700 870 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 BEAN1Q3B7T3 259 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CDONQ4KMG0 1287 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SLC39A12Q504Y0 691 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ZNF385BQ569K4 471 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RNASE12Q5GAN4 147 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ARL13AQ5H913 290 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TOR1AIP1Q5JTV8 583 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C6orf136Q5SQH8 315 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C6orf141Q5SZD1 244 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C10orf76Q5T2E6 689 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 LRIF1Q5T3J3 769 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C6orf163Q5TEZ5 329 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SFMBT2Q5VUG0 894 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PLA2G4FQ68DD2 849 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 DHRS7BQ6IAN0 325 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TCTN3Q6NUS6 607 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 FUT10Q6P4F1 479 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NOTUMQ6P988 496 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 BLOC1S2Q6QNY1 142 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PPP1R21Q6ZMI0 780 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MTSS1LQ765P7 747 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 HIST3H2AQ7L7L0 130 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 OTUD6AQ7L8S5 288 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TSPAN33Q86UF1 283 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PALB2Q86YC2 1186 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C4orf19Q8IY42 314 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CCDC13Q8IYE1 715 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MAML2Q8IZL2 1156 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 BLIDQ8IZY5 108 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 PAQR4Q8N4S7 273 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ZCCHC9Q8N567 271 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RTL3Q8N8U3 475 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 RNF149Q8NC42 400 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 ANKRD20A12PQ8NF67 263 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 FAR1Q8WVX9 515 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 N4BP2L2Q92802 583 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 TMEM143Q96AN5 459 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CLDN23Q96B33 292 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 CEP170P1Q96L14 293 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 C16orf45Q96MC5 204 aaPredicted RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 INTS14Q96SY0 518 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 FAM118BQ9BPY3 351 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SH2D3AQ9BRG2 576 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 LXNQ9BS40 222 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NFKBIZQ9BYH8 718 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NUF2Q9BZD4 464 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 SLC5A7Q9GZV3 580 aa3.17□□□□□ -1.9
CNOT1-221ENST00000569924 NOL11Q9H8H0 719 aaKnown RBP3.17□□□□□ -1.9
CNOT1-221ENST00000569924 MAGEE1Q9HCI5 957 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms