RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 OR5H15A6NDH6 313 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 VSTM2BA6NLU5 285 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 MYO1FO00160 1098 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 KCNK1O00180 336 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 DDX3XO00571 662 aaKnown RBP eCLIP8.31□□□□□ -1.08
SMG1-216ENST00000569122 PRRG2O14669 202 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 AURKAO14965 403 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 DSCR3O14972 297 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 TTI1O43156 1089 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 GADD45BO75293 160 aaPredicted RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 ZWINTO95229 277 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ABOP16442 354 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 UGT2B7P16662 529 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 CDK11BP21127 795 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 GABRA4P48169 554 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ALDH6A1Q02252 535 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 SLC25A11Q02978 314 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 UBXN1Q04323 297 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 MMRN1Q13201 1228 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 DPYSL3Q14195 570 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 KIR2DS3Q14952 304 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 KRT31Q15323 416 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 DEFB110Q30KQ9 67 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ATG9BQ674R7 924 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 TXNRD3NBQ6F5E7 133 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 TMEM211Q6ICI0 200 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 PRMT9Q6P2P2 845 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 CNSTQ6PJW8 725 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 IRF2BP2Q7Z5L9 587 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ZGRF1Q86YA3 2104 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 MCATQ8IVS2 390 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 CNTD1Q8N815 330 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 DNAAF3Q8N9W5 541 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 FAM98AQ8NCA5 519 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 SPATA3Q8NHX4 192 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ENOX1Q8TC92 643 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 BRIX1Q8TDN6 353 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 TFGQ92734 400 aaPredicted RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 SLC22A18Q96BI1 424 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 TADA1Q96BN2 335 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 MIEF2Q96C03 454 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ULK4Q96C45 1275 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 SDCCAG3Q96C92 435 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 OR2A14Q96R47 310 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 REPIN1Q9BWE0 567 aaKnown RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 CUTCQ9NTM9 273 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 RIC8BQ9NVN3 520 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 MYO1AQ9UBC5 1043 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 FAM8A1Q9UBU6 413 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 ZNF282Q9UDV7 671 aaPredicted RBP8.31□□□□□ -1.08
SMG1-216ENST00000569122 MKL2Q9ULH7 1088 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 FER1L5A0AVI2 2057 aa8.31□□□□□ -1.08
SMG1-216ENST00000569122 C2orf81A6NN90 581 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 FAM171A2A8MVW0 826 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 RASGRF2O14827 1237 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 PPP1R12AO14974 1030 aaPredicted RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 STX7O15400 261 aaKnown RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 WDPCPO95876 746 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 IGFBP2P18065 325 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 PRLHRP49683 370 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 FOXL2P58012 376 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 PLOD1Q02809 727 aaPredicted RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 GBE1Q04446 702 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 LTBQ06643 244 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 BOP1Q14137 746 aaKnown RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 PDK1Q15118 436 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 ZIC1Q15915 447 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 ATP13A4Q4VNC1 1196 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 TFDP3Q5H9I0 405 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 ZNF766Q5HY98 468 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 HIBCHQ6NVY1 386 aaPredicted RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 UNC5AQ6ZN44 842 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 GLT6D1Q7Z4J2 308 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 GHDCQ8N2G8 530 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 TAB3Q8N5C8 712 aaPredicted RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 HORMAD2Q8N7B1 307 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 MYRIPQ8NFW9 859 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 ERGIC2Q96RQ1 377 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 SYT11Q9BT88 431 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 LUC7LQ9NQ29 371 aaKnown RBP8.3□□□□□ -1.08
SMG1-216ENST00000569122 ENAMQ9NRM1 1142 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 FAM153AQ9UHL3 310 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 LCMT1Q9UIC8 334 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 C3orf18Q9UK00 162 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 PPT2Q9UMR5 302 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 SPO11Q9Y5K1 396 aa8.3□□□□□ -1.08
SMG1-216ENST00000569122 A0A0A6YYK5 440 aaPredicted RBP8.29□□□□□ -1.08
SMG1-216ENST00000569122 LOC285095A0A1B0GVY8 99 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 A0A1W2PQ72 361 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 LGALS16A8MUM7 142 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 ISM1B1AKI9 464 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 FAM227AF5H4B4 570 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 CDK2AP1O14519 115 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 PRPF4O43172 522 aaKnown RBP eCLIP8.29□□□□□ -1.08
SMG1-216ENST00000569122 SRPX2O60687 465 aaPredicted RBP8.29□□□□□ -1.08
SMG1-216ENST00000569122 FKBP9O95302 570 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 CHRM5P08912 532 aaPredicted RBP8.29□□□□□ -1.08
SMG1-216ENST00000569122 CD48P09326 243 aa8.29□□□□□ -1.08
SMG1-216ENST00000569122 ZGLP1P0C6A0 271 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms