RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 DCXO43602 365 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 DIAPH2O60879 1101 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PRDM1O75626 825 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PSMD10O75832 226 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLU7O95391 586 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 C22orf31O95567 290 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 MT-ND3P03897 115 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PCNAP12004 261 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ACTN1P12814 892 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 GABRB1P18505 474 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 AGAP20933 346 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CPT2P23786 658 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 POU1F1P28069 291 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 EEF1DP29692 281 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 HNF4AP41235 474 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CAPZA2P47755 286 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 VCPP55072 806 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ERVFC1-1P60608 527 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 KLRC3Q07444 240 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 C17orf67Q0P5P2 114 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 AP1B1Q10567 949 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 AIMP2Q13155 320 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 GPNMBQ14956 572 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 VEPH1Q14D04 833 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC39A14Q15043 492 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 E2F5Q15329 346 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SGO1Q5FBB7 561 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 KRBOX4Q5JUW0 171 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 GKAP1Q5VSY0 366 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TXNDC8Q6A555 127 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TRAT1Q6PIZ9 186 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 B3GNT6Q6ZMB0 384 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CHST3Q7LGC8 479 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZC3HC1Q86WB0 502 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TDRPQ86YL5 185 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC35F3Q8IY50 421 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 IL17RCQ8NAC3 791 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 POMGNT2Q8NAT1 580 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 C11orf65Q8NCR3 313 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 OR6J1Q8NGC5 347 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 GDAP1Q8TB36 358 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PRPF31Q8WWY3 499 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF653Q96CK0 615 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 RMDN1Q96DB5 314 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ADGRG7Q96K78 797 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 BBS4Q96RK4 519 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 MYCBPQ99417 103 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SRSF8Q9BRL6 282 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TEX12Q9BXU0 123 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CRNKL1Q9BZJ0 848 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TKTL2Q9H0I9 626 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 KCNN2Q9H2S1 579 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 ESRP2Q9H6T0 727 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC35C2Q9NQQ7 365 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 GIMAP4Q9NUV9 329 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 COQ3Q9NZJ6 369 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 MARCH4Q9P2E8 410 aaPredicted RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CPSF2Q9P2I0 782 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CDC14AQ9UNH5 594 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 CARD8Q9Y2G2 431 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PAM16Q9Y3D7 125 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PTRH2Q9Y3E5 179 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 LSM4Q9Y4Z0 139 aaKnown RBP3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TRPV2Q9Y5S1 764 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 NFS1Q9Y697 457 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 TRIOO75962 3097 aa3.3□□□□□ -1.88
HMGB1P6-201ENST00000569046 PLSCR5A0PG75 271 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 OR2A25A4D2G3 310 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 GLOD5A6NK44 160 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 TAF4O00268 1085 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 CTDSP2O14595 271 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PAGE4O60829 102 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 NDUFS7O75251 213 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 KDM4BO94953 1096 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 NDUFB4O95168 129 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 NDUFB10O96000 172 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PDGFBP01127 241 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 IGHDP01880 384 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 FAM200BP0CF97 657 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SP100P23497 879 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 HNRNPH1P31943 449 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 CPOXP36551 454 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLC15A1P46059 708 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 MRPL12P52815 198 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 GAS1P54826 345 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 RPL36AP83881 106 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 UBXN1Q04323 297 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ILF3Q12906 894 aaKnown RBP eCLIP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 IKQ13123 557 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ITGADQ13349 1161 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SNTA1Q13424 505 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 GPM6BQ13491 265 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 CAMK2DQ13557 499 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 SLMAPQ14BN4 828 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 RNPS1Q15287 305 aaKnown RBP3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 NTRK2Q16620 822 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 PTGISQ16647 500 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF674Q2M3X9 581 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 C2orf68Q2NKX9 166 aa3.29□□□□□ -1.88
HMGB1P6-201ENST00000569046 ZNF628Q5EBL2 1059 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms