RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 SH3BGRL2Q9UJC5 107 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 ITGB1BP2Q9UKP3 347 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 ENTPD4Q9Y227 616 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 HEBP2Q9Y5Z4 205 aa14.29□□□□□ -0.12
USB1-214ENST00000568848 hCG_1818297A0A087WSY0 165 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 AGAP14A8MT82 685 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 ISM1B1AKI9 464 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 MATN2O00339 956 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 IFRD1O00458 451 aaPredicted RBP14.28□□□□□ -0.12
USB1-214ENST00000568848 FFAR3O14843 346 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 GPR42O15529 346 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 CELA2AP08217 269 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 MSL3P1P0C860 447 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 MAGP20916 626 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 ZNF169Q14929 603 aaPredicted RBP14.28□□□□□ -0.12
USB1-214ENST00000568848 DBN1Q16643 649 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 PRAMEF13Q5VWM6 474 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 DENND5AQ6IQ26 1287 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 KIRREL2Q6UWL6 708 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 RANBP10Q6VN20 620 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 ARHGEF18Q6ZSZ5 1173 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 TAS2R42Q7RTR8 314 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 HOOK3Q86VS8 718 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 TAB3Q8N5C8 712 aaPredicted RBP14.28□□□□□ -0.12
USB1-214ENST00000568848 FAR1Q8WVX9 515 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 KRT35Q92764 455 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 P3H4Q92791 437 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 C8orf44Q96CB5 159 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 THOC3Q96J01 351 aaKnown RBP14.28□□□□□ -0.12
USB1-214ENST00000568848 SPSB2Q99619 263 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 ZDHHC3Q9NYG2 299 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 MAU2Q9Y6X3 613 aa14.28□□□□□ -0.12
USB1-214ENST00000568848 A0A0J9YY10 115 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 C2orf81A6NN90 581 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 H7C0C1 242 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 AKR1B10O60218 316 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 HBQ1P09105 142 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 ITGALP20701 1170 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 ARHGAP25P42331 645 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 ATP5OP48047 213 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 ST13P50502 369 aaKnown RBP14.27□□□□□ -0.13
USB1-214ENST00000568848 AIMP2Q13155 320 aaKnown RBP14.27□□□□□ -0.13
USB1-214ENST00000568848 NAA30Q147X3 362 aaPredicted RBP14.27□□□□□ -0.13
USB1-214ENST00000568848 NKG7Q16617 165 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 AADACL2Q6P093 401 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 SNX20Q7Z614 316 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 CCDC110Q8TBZ0 833 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 PPP4R1Q8TF05 950 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 TM9SF4Q92544 642 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 TAAR6Q96RI8 345 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 MVB12BQ9H7P6 319 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 EURLQ9NYK6 297 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 IMPACTQ9P2X3 320 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 ASF1AQ9Y294 204 aa14.27□□□□□ -0.13
USB1-214ENST00000568848 MACROD2A1Z1Q3 448 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 BHMG1C9JSJ3 638 aaPredicted RBP14.26□□□□□ -0.13
USB1-214ENST00000568848 MAP3K7O43318 606 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 RALBP11234 206 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 EDN3P14138 238 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 ACRV1P26436 265 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 TSFMP43897 325 aaKnown RBP14.26□□□□□ -0.13
USB1-214ENST00000568848 GCGRP47871 477 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 NR2C2P49116 596 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 GEMP55040 296 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 SOX8P57073 446 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 TFDP2Q14188 446 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 LRRC38Q5VT99 294 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 VSIG1Q86XK7 387 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 VRK3Q8IV63 474 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 LINC01555Q8NAE3 123 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 PROKR1Q8TCW9 393 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 LKAAEAR1Q8TD35 194 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 ITLN2Q8WWU7 325 aaPredicted RBP14.26□□□□□ -0.13
USB1-214ENST00000568848 IP6K3Q96PC2 410 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 SLX1AQ9BQ83 275 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 NDC1Q9BTX1 674 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 TSPY26PQ9H489 355 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 ZNF160Q9HCG1 818 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 DDX56Q9NY93 547 aaKnown RBP14.26□□□□□ -0.13
USB1-214ENST00000568848 SMARCAL1Q9NZC9 954 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 COPG2Q9UBF2 871 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 AP1M2Q9Y6Q5 423 aa14.26□□□□□ -0.13
USB1-214ENST00000568848 NF1P21359 2839 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 IGLV3-16A0A075B6K0 115 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 C17orf113A0A1B0GUU1 675 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 CFAP99D6REC4 459 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 ZNHIT1O43257 154 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 JRKO75564 520 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 IPO13O94829 963 aaKnown RBP14.25□□□□□ -0.13
USB1-214ENST00000568848 MMP11P24347 488 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 ACADLP28330 430 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 TDGF1P3P51864 188 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 KRTAP10-9P60411 292 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 CDSNQ15517 529 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 AGAP7PQ5VUJ5 663 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 IGFL2Q6UWQ7 119 aa14.25□□□□□ -0.13
USB1-214ENST00000568848 NCCRP1Q6ZVX7 275 aaPredicted RBP14.25□□□□□ -0.13
USB1-214ENST00000568848 MCATQ8IVS2 390 aaKnown RBP14.25□□□□□ -0.13
USB1-214ENST00000568848 SHISA5Q8N114 240 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms