RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 MED21Q13503 144 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 KIAA0040Q15053 153 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 AAK1Q2M2I8 961 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 CACHD1Q5VU97 1274 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 GALNT13Q8IUC8 556 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 HID1Q8IV36 788 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 TERB1Q8NA31 727 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 MTFMTQ96DP5 389 aaKnown RBP17.68■□□□□ 0.42
SMPD3-211ENST00000568373 UHRF1Q96T88 793 aaPredicted RBP17.68■□□□□ 0.42
SMPD3-211ENST00000568373 ZBTB18Q99592 522 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 TMEM245Q9H330 911 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 MUC13Q9H3R2 512 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 TRPV4Q9HBA0 871 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 ZFP14Q9HCL3 533 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 THG1LQ9NWX6 298 aaKnown RBP17.68■□□□□ 0.42
SMPD3-211ENST00000568373 SCOCQ9UIL1 159 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 COQ6Q9Y2Z9 468 aa17.68■□□□□ 0.42
SMPD3-211ENST00000568373 KIAA1549LQ6ZVL6 1849 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 SLC5A10A0PJK1 596 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 A6NHS1 94 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ARHGEF33A8MVX0 844 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 SOD1P00441 154 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ITPKAP23677 461 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 FCARP24071 287 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 MAP4P27816 1152 aaKnown RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 DGKQP52824 942 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 LIPEQ05469 1076 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ABRQ12979 859 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 DLEU7Q6UYE1 221 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 PTRH1Q86Y79 214 aaKnown RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 LIX1Q8N485 282 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 GOLM1Q8NBJ4 401 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 CANT1Q8WVQ1 401 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 SELENOMQ8WWX9 145 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 LRTOMTQ8WZ04 291 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 TMEM74Q96NL1 305 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 KCTD14Q9BQ13 255 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ATG10Q9H0Y0 220 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 VCXQ9H320 206 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ELOVL6Q9H5J4 265 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 CNOT6Q9ULM6 557 aaKnown RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ARPC2O15144 300 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 RNASEH1O60930 286 aaKnown RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 UBTFL6P0CB48 400 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ADRB3P13945 408 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 PREPP48147 710 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 PFN3P60673 137 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 FOLH1Q04609 750 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 TMEM220Q6QAJ8 160 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 NLRP8Q86W28 1048 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 SPPL2CQ8IUH8 684 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 GLB1L3Q8NCI6 653 aaPredicted RBP17.67■□□□□ 0.42
SMPD3-211ENST00000568373 NUDT8Q8WV74 236 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 PPP1R16AQ96I34 528 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 FAM129BQ96TA1 746 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 EPHX3Q9H6B9 360 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 ARMC1Q9NVT9 282 aa17.67■□□□□ 0.42
SMPD3-211ENST00000568373 KIF26AQ9ULI4 1882 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 COL4A3Q01955 1670 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 RECQL5O94762 991 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 LYNP07948 512 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 PBX2P40425 430 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 INPP5AQ14642 412 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 SLC44A4Q53GD3 710 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 NAIF1Q69YI7 327 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 ZNF765Q7L2R6 523 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 IFNEQ86WN2 208 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 LILRA3Q8N6C8 439 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 NUS1Q96E22 293 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 MAGEB10Q96LZ2 347 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 DPY30Q9C005 99 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 CCM2LQ9NUG4 571 aaPredicted RBP17.66■□□□□ 0.42
SMPD3-211ENST00000568373 DZANK1Q9NVP4 752 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 DLGAP2Q9P1A6 1054 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 SNX13Q9Y5W8 968 aa17.66■□□□□ 0.42
SMPD3-211ENST00000568373 DHRS12A0PJE2 317 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PRAMEF4O60810 478 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 C6P13671 934 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 SHHQ15465 462 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 USP39Q53GS9 565 aaKnown RBP17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PRAMEF9Q5VWM5 478 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 TANGO2Q6ICL3 276 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 SUSD1Q6UWL2 747 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 SLC22A15Q8IZD6 547 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 SLC13A3Q8WWT9 602 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 LMAN2LQ9H0V9 348 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 CNOT11Q9UKZ1 510 aaKnown RBP17.65■□□□□ 0.42
SMPD3-211ENST00000568373 TBC1D3BA6NDS4 549 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 K7ESM1 405 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PLK4O00444 970 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 CATP04040 527 aaKnown RBP17.65■□□□□ 0.42
SMPD3-211ENST00000568373 BCKDHAP12694 445 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PRPH2P23942 346 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 MAPK9P45984 424 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 NEK2P51955 445 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 PWP1Q13610 501 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 FAM174BQ3ZCQ3 159 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 VITQ6UXI7 678 aa17.65■□□□□ 0.42
SMPD3-211ENST00000568373 GPR149Q86SP6 731 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms