RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TWSG1	Q9GZX9	223 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	KLHL25	Q9H0H3	589 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	P2RY12	Q9H244	342 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	KCNF1	Q9H3M0	494 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	SYBU	Q9NX95	663 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	SAMD15	Q9P1V8	674 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	GNPTG	Q9UJJ9	305 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	TUBD1	Q9UJT1	453 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	SOX13	Q9UN79	622 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	CDYL	Q9Y232	598 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	POLH	Q9Y253	713 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	FARSA	Q9Y285	508 aa	Known RBP	6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	KCNMB2	Q9Y691	235 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	MYO18B	Q8IUG5	2567 aa		6.69	□□□□□ -1.34
SF3B3-209	ENST00000567635	ESPL1	Q14674	2120 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FAM237B	A0A1B0GVD1	139 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CDC14C	A4D256	554 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ISM1	B1AKI9	464 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635		H3BMM5	538 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	MEN1	O00255	615 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	PGRMC1	O00264	195 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SUV39H1	O43463	412 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC28A2	O43868	658 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	KIF5C	O60282	957 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	HBQ1	P09105	142 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FURIN	P09958	794 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	MLN	P12872	115 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	PAM	P19021	973 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CD9	P21926	228 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ARNT	P27540	789 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FMO4	P31512	558 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	EIF3B	P55884	814 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ITGA1	P56199	1179 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	GPS2	Q13227	327 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CYP1B1	Q16678	543 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	KCTD19	Q17RG1	926 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC5A12	Q1EHB4	618 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ATP1A1-AS1	Q5TC04	95 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	PRAMEF17	Q5VTA0	474 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	IZUMO3	Q5VZ72	239 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	NEPRO	Q6NW34	567 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CCDC137	Q6PK04	289 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	UNC5D	Q6UXZ4	953 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZNF517	Q6ZMY9	492 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ATG14	Q6ZNE5	492 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CDHR3	Q6ZTQ4	885 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	OTOA	Q7RTW8	1153 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	PRICKLE2	Q7Z3G6	844 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	TRIM73	Q86UV7	250 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CAND1	Q86VP6	1230 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	GPR135	Q8IZ08	494 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	DSEL	Q8IZU8	1212 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC35F6	Q8N357	371 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	C19orf47	Q8N9M1	422 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	OR1L3	Q8NH93	324 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FLVCR1-AS1	Q8TAF5	88 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	C9orf43	Q8TAL5	461 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	LKAAEAR1	Q8TD35	194 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ACTRT1	Q8TDG2	376 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	GRK7	Q8WTQ7	553 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	COG1	Q8WTW3	980 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SKA2	Q8WVK7	121 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC22A18	Q96BI1	424 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	BIRC8	Q96P09	236 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	OSBPL9	Q96SU4	736 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	DPH2	Q9BQC3	489 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC7A5P2	Q9GIP4	190 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CHRNA10	Q9GZZ6	450 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CHST8	Q9H2A9	424 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ACTL8	Q9H568	366 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	ACTR5	Q9H9F9	607 aa	Predicted RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	XAB2	Q9HCS7	855 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FAM60A	Q9NP50	221 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	TRMT1	Q9NXH9	659 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SPHK1	Q9NYA1	384 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	SLC39A10	Q9ULF5	831 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	PLAGL1	Q9UM63	463 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	CRYL1	Q9Y2S2	319 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	NEU2	Q9Y3R4	380 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	AP1M2	Q9Y6Q5	423 aa		6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	FLNB	O75369	2602 aa	Known RBP	6.68	□□□□□ -1.34
SF3B3-209	ENST00000567635	BOD1L1	Q8NFC6	3051 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	SVIL	O95425	2214 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635		A0A0J9YY10	115 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	GOLGA6L10	A0A0M3HER8	536 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	GOLGA8K	D6RF30	607 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635		E7EQ34	232 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	MKRN2OS	H3BPM6	223 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	GOLGA8T	H3BQL2	631 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	GOLGA8M	H3BSY2	632 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	CES2	O00748	559 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	RASGRF2	O14827	1237 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	ZNF749	O43361	778 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	OR2B3	O76000	313 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	S1PR4	O95977	384 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	ESR1	P03372	595 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	RAB40AL	P0C0E4	278 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	CHRM3	P20309	590 aa		6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	OGN	P20774	298 aa	Known RBP	6.67	□□□□□ -1.34
SF3B3-209	ENST00000567635	AGXT	P21549	392 aa		6.67	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms