RNA–Protein interactions for RNA: ENST00000567015.5

UTP4-208, Transcript of UTP4, small subunit processome component, human

TSL 2

Gene UTP4, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UTP4-208	ENST00000567015	CCNF	P41002	786 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	CLCN7	P51798	805 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	TERF1	P54274	439 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	DR1	Q01658	176 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	DHX9	Q08211	1270 aa	Known RBP	11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	IZUMO3	Q5VZ72	239 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	ZNF549	Q6P9A3	640 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	FBXO38	Q6PIJ6	1188 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	DENND6A	Q8IWF6	608 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	ZSCAN1	Q8NBB4	408 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	FBXO15	Q8NCQ5	510 aa	Predicted RBP	11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	C2CD4A	Q8NCU7	369 aa	Predicted RBP	11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	OR2L8	Q8NGY9	312 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	SLC39A7	Q92504	469 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	KCNJ9	Q92806	393 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	RAD51AP1	Q96B01	352 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	TCTN2	Q96GX1	697 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	CAPZA3	Q96KX2	299 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	RAB11FIP5	Q9BXF6	653 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	LHX9	Q9NQ69	397 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	GALP	Q9UBC7	116 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	ASIC3	Q9UHC3	531 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	FBXO5	Q9UKT4	447 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	PADI1	Q9ULC6	663 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	CRYL1	Q9Y2S2	319 aa		11.43	□□□□□ -0.58
UTP4-208	ENST00000567015	ZNF891	A8MT65	544 aa	Predicted RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	C21orf140	B9A014	251 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	EIF3F	O00303	357 aa	Predicted RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	PSIP1	O75475	530 aa	Known RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	F8A1	P23610	371 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	RORA	P35398	523 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ARL4D	P49703	201 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ABR	Q12979	859 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	CTBP1	Q13363	440 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	THOC5	Q13769	683 aa	Known RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	CRYM	Q14894	314 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	GPR19	Q15760	415 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ZIC1	Q15915	447 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	SPANXN3	Q5MJ09	141 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	STEAP4	Q687X5	459 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ZNF470	Q6ECI4	717 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	CYHR1	Q6ZMK1	362 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	KIAA0408	Q6ZU52	694 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ZNF572	Q7Z3I7	529 aa	Predicted RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	IGDCC3	Q8IVU1	814 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	DNAJC22	Q8N4W6	341 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	C19orf47	Q8N9M1	422 aa	Known RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	GALNT6	Q8NCL4	622 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	MAGEC3	Q8TD91	643 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	KIAA1143	Q96AT1	154 aa	Predicted RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	SLC22A18	Q96BI1	424 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	CATSPER2	Q96P56	530 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	WDR83	Q9BRX9	315 aa	Known RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	FAM167B	Q9BTA0	163 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	GPN2	Q9H9Y4	310 aa	Predicted RBP	11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	FAM60A	Q9NP50	221 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	IL1RAPL1	Q9NZN1	696 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	IL17B	Q9UHF5	180 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	DHRS7	Q9Y394	339 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	NFS1	Q9Y697	457 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	TEX264	Q9Y6I9	313 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	FER1L5	A0AVI2	2057 aa		11.42	□□□□□ -0.58
UTP4-208	ENST00000567015	ATRX	P46100	2492 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015		A0A0J9YY10	115 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015		A0A1W2PPV9	198 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	GFY	I3L273	518 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	NDC80	O14777	642 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	TTI1	O43156	1089 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	CPNE3	O75131	537 aa	Known RBP	11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	C1QL1	O75973	258 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	HAUS5	O94927	633 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	CHRM3	P20309	590 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	GABRB3	P28472	473 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	SLC1A2	P43004	574 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	GCGR	P47871	477 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	ITGA8	P53708	1063 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	CSE1L	P55060	971 aa	Known RBP	11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	TIAL1	Q01085	375 aa	Known RBP eCLIP	11.41	□□□□□ -0.58	1e-8	■■■■■ 30.5
UTP4-208	ENST00000567015	MC1R	Q01726	317 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	CYP2A13	Q16696	494 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	ACSBG2	Q5FVE4	666 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	ZNF385C	Q66K41	422 aa	Predicted RBP	11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	TTC23L	Q6PF05	361 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	CDHR3	Q6ZTQ4	885 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	KCNMB4	Q86W47	210 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	KLHL7	Q8IXQ5	586 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	UNC5B	Q8IZJ1	945 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	PDIK1L	Q8N165	341 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	ZBTB2	Q8N680	514 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	SLC38A9	Q8NBW4	561 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	SPATA4	Q8NEY3	305 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	OR1L3	Q8NH93	324 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	GIMAP7	Q8NHV1	300 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	DENND1A	Q8TEH3	1009 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	SNF8	Q96H20	258 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	SLC30A3	Q99726	388 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	AARSD1	Q9BTE6	412 aa	Known RBP	11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	GPR87	Q9BY21	358 aa		11.41	□□□□□ -0.58
UTP4-208	ENST00000567015	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms