RNA–Protein interactions for RNA: ENST00000566400.5

BBS4-210, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 2,055 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-210ENST00000566400 PLOD2O00469 737 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 CXCR6O00574 342 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 WNT9AO14904 365 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 PQBP1O60828 265 aaKnown RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 SEC24DO94855 1032 aaPredicted RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 PRAMEF12O95522 483 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 CPNE6O95741 557 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 LRG1P02750 347 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 GNAO1P09471 354 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 ITGB6P18564 788 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 UGT1A6P19224 532 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 DGKQP52824 942 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 TMBIM6P55061 237 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 TPD52P55327 224 aaPredicted RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 HPCAP84074 193 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 LRRC74AQ0VAA2 488 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 PHKG1Q16816 387 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 ERICH5Q6P6B1 374 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 CRTC1Q6UUV9 634 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 ISLR2Q6UXK2 745 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 UBE2R2Q712K3 238 aaPredicted RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 RALGPS2Q86X27 583 aaPredicted RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 ZCCHC7Q8N3Z6 543 aaKnown RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 L3MBTL4Q8NA19 623 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 OR10A6Q8NH74 314 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 OR5K1Q8NHB7 308 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 ATL1Q8WXF7 558 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 FAM120BQ96EK7 910 aaKnown RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 SPATA9Q9BWV2 254 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 CXorf21Q9HAI6 301 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 IL21Q9HBE4 155 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 DCAF13Q9NV06 445 aaKnown RBP9.11□□□□□ -0.95
BBS4-210ENST00000566400 GMEB1Q9Y692 573 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 PRSS21Q9Y6M0 314 aa9.11□□□□□ -0.95
BBS4-210ENST00000566400 PLXNA4Q9HCM2 1894 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 KLHL33A6NCF5 533 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 K7ERQ8 282 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 PER2O15055 1255 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 CCNDBP1O95273 360 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 SNAP29O95721 258 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 FTH1P02794 183 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 BCKDHAP12694 445 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 HSD3B1P14060 373 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 DDX6P26196 483 aaKnown RBP eCLIP9.1□□□□□ -0.95
BBS4-210ENST00000566400 HSD3B2P26439 372 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 GABRR2P28476 465 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 RXRGP48443 463 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 TRPC1P48995 793 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 DCDC1P59894 354 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 SRSF11Q05519 484 aaKnown RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 CSTF3Q12996 717 aaKnown RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 GBX1Q14549 363 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 PTGR1Q14914 329 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 CARD16Q5EG05 197 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 ZC3H12BQ5HYM0 836 aaKnown RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 SPANXN4Q5MJ08 99 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 LIPJQ5W064 366 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 TXNDC8Q6A555 127 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 C22orf39Q6P5X5 142 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 BRAT1Q6PJG6 821 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 STK32CQ86UX6 486 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 CLDN19Q8N6F1 224 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 PJA1Q8NG27 643 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 LKAAEAR1Q8TD35 194 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 SLC22A17Q8WUG5 538 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 ZNF689Q96CS4 500 aaPredicted RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 SCLYQ96I15 445 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 REXO5Q96IC2 774 aaKnown RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 KAT8Q9H7Z6 458 aaKnown RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 NTN4Q9HB63 628 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 PLGRKTQ9HBL7 147 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 CFAP97Q9P2B7 532 aa9.1□□□□□ -0.95
BBS4-210ENST00000566400 HECAQ9UBI9 543 aaPredicted RBP9.1□□□□□ -0.95
BBS4-210ENST00000566400 TRBV5-3A0A0A0MS03 114 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 SOBPA7XYQ1 873 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 UPK1AO00322 258 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 FFAR3O14843 346 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 GPR42O15529 346 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 SMAD6O43541 496 aaKnown RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 DFNA5O60443 496 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 CDK4P11802 303 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 SRCP12931 536 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 ATP1B2P14415 290 aaPredicted RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 PRPS1L1P21108 318 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 UGT1A1P22309 533 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 UGT1A4P22310 534 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 AOAHP28039 575 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 UGT1A3P35503 534 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 UGT1A5P35504 534 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 RECQLP46063 649 aaPredicted RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 SKIV2LQ15477 1246 aaKnown RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 TCTN1Q2MV58 587 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 C18orf21Q32NC0 220 aaPredicted RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 OTUD3Q5T2D3 398 aaPredicted RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 LRRC66Q68CR7 880 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 TMEM214Q6NUQ4 689 aaKnown RBP9.09□□□□□ -0.95
BBS4-210ENST00000566400 SERPINA11Q86U17 422 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 CALHM3Q86XJ0 350 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 PGBD3Q8N328 593 aa9.09□□□□□ -0.95
BBS4-210ENST00000566400 BEND7Q8N7W2 519 aaPredicted RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms