RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 ANKRD66B4E2M5 251 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 PER2O15055 1255 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 NADKO95544 446 aaPredicted RBP21.13■□□□□ 0.97
SPSB3-208ENST00000566339 ITGB1P05556 798 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 ZDHHC11BP0C7U3 371 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 VAC14Q08AM6 782 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 NPTX1Q15818 432 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 DDR2Q16832 855 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 HABP4Q5JVS0 413 aaKnown RBP21.13■□□□□ 0.97
SPSB3-208ENST00000566339 KIAA1958Q8N8K9 716 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 SOCS4Q8WXH5 440 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 ITCHQ96J02 903 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 DACH2Q96NX9 599 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 CCDC90BQ9GZT6 254 aa21.13■□□□□ 0.97
SPSB3-208ENST00000566339 TAF4O00268 1085 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 KDM1AO60341 852 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ACSL4O60488 711 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ULK1O75385 1050 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 CLDN11O75508 207 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 F11P03951 625 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 OR4Q2P0C623 313 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 HOXB9P17482 250 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 EFNA1P20827 205 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 DGKAP23743 735 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 HOXD12P35452 270 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ARL1P40616 181 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 IST1P53990 364 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 CLDN8P56748 225 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 NKX3-2P78367 333 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 DSC1Q08554 894 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ABRQ12979 859 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ADPRMQ3LIE5 342 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 LYPLAL1Q5VWZ2 237 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 KDM4DQ6B0I6 523 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 CHST9Q7L1S5 443 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 SNX20Q7Z614 316 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 TSPYL5Q86VY4 417 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 CIR1Q86X95 450 aaPredicted RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ZFP90Q8TF47 636 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 ESAMQ96AP7 390 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 OR52E6Q96RD3 313 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 CD244Q9BZW8 370 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 AGO1Q9UL18 857 aaKnown RBP21.12■□□□□ 0.97
SPSB3-208ENST00000566339 SLC27A5Q9Y2P5 690 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 RAI2Q9Y5P3 530 aa21.12■□□□□ 0.97
SPSB3-208ENST00000566339 MKI67P46013 3256 aaKnown RBP21.11■□□□□ 0.97
SPSB3-208ENST00000566339 PTGES3LE9PB15 166 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 RGS10O43665 173 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 XYLBO75191 536 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 SERPINA1P01009 418 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 ZNF7P17097 686 aaPredicted RBP21.11■□□□□ 0.97
SPSB3-208ENST00000566339 FPR1P21462 350 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 PRPH2P23942 346 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 CD52P31358 61 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 CACNB2Q08289 660 aaPredicted RBP21.11■□□□□ 0.97
SPSB3-208ENST00000566339 RAPSNQ13702 412 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 USP39Q53GS9 565 aaKnown RBP21.11■□□□□ 0.97
SPSB3-208ENST00000566339 SPANXN4Q5MJ08 99 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 ERICH5Q6P6B1 374 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 B3GNT8Q7Z7M8 397 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 TMEM179BQ7Z7N9 219 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 MIB1Q86YT6 1006 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 TRPV1Q8NER1 839 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 LPCAT1Q8NF37 534 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 RHOXF1Q8NHV9 184 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 TRIB2Q92519 343 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 GLMNQ92990 594 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 NCLNQ969V3 563 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 TESCQ96BS2 214 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 PITX2Q99697 317 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 THG1LQ9NWX6 298 aaKnown RBP21.11■□□□□ 0.97
SPSB3-208ENST00000566339 OPTCQ9UBM4 332 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 ANGPTL3Q9Y5C1 460 aa21.11■□□□□ 0.97
SPSB3-208ENST00000566339 H0Y626 953 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 AREL1O15033 823 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 OR1I1O60431 355 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 TRIM16O95361 564 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CNPP09543 421 aaKnown RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CTSHP09668 335 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 MAPK1P28482 360 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 DNAJA1P31689 397 aaKnown RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 RXRGP48443 463 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CDKN1CP49918 316 aaPredicted RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CLCA4Q14CN2 919 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 PIWIL3Q7Z3Z3 882 aaKnown RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 SERPINA11Q86U17 422 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 ZDHHC21Q8IVQ6 265 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CADM3Q8N126 398 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 LIX1Q8N485 282 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 MMP27Q9H306 513 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 SPC25Q9HBM1 224 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 KIAA1522Q9P206 1035 aaPredicted RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 KLHL42Q9P2K6 505 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 RPS6KA6Q9UK32 745 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 NDRG4Q9ULP0 352 aaKnown RBP21.1■□□□□ 0.97
SPSB3-208ENST00000566339 E9PQ18 207 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 BMP4P12644 408 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 CD6P30203 668 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 SLC11A2P49281 568 aa21.1■□□□□ 0.97
SPSB3-208ENST00000566339 UBE2UQ5VVX9 321 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms