RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 TSPAN4O14817 238 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 LIN7AO14910 233 aaPredicted RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CLGNO14967 610 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 EIF3DO15371 548 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CYTH3O43739 400 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TMCC1O94876 653 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CELA2AP08217 269 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PLEKP08567 350 aaPredicted RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF286BP0CG31 522 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 GAP43P17677 238 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TFEBP19484 476 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TNFRSF1BP20333 461 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ABCD1P33897 745 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PIGAP37287 484 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 EIF2S3P41091 472 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 GARSP41250 739 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 MATR3P43243 847 aaKnown RBP eCLIP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PMS2P54278 862 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SLC12A2P55011 1212 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SRSF4Q08170 494 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 FOXF2Q12947 444 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 FRG1Q14331 258 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ALG10Q5BKT4 473 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ANKRD20A8PQ5CZ79 823 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ALG10BQ5I7T1 473 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ERMARDQ5T6L9 678 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 AAGABQ6PD74 315 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 IL20RBQ6UXL0 311 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 DSTYKQ6XUX3 929 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 STXBP4Q6ZWJ1 553 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TAOK1Q7L7X3 1001 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM116Q8NCL8 245 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 IFT81Q8WYA0 676 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CHMP6Q96FZ7 201 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 HES6Q96HZ4 224 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 MBOAT7Q96N66 472 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SPAG5Q96R06 1193 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 BBS4Q96RK4 519 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SLC40A1Q9NP59 571 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TAS2R10Q9NYW0 307 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 DLGAP2Q9P1A6 1054 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 MTRF1LQ9UGC7 380 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 COX11Q9Y6N1 276 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 DPPA5A6NC42 116 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 E5RJQ4 531 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 NDC80O14777 642 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 EPHB6O15197 1021 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 MGRN1O60291 552 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 GUCY1B2O75343 617 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 KRT14P02533 472 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 POLR2MP0CAP2 368 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PDHBP11177 359 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SLC2A4P14672 509 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CHRNA3P32297 505 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 STAT1P42224 750 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 COMPP49747 757 aaPredicted RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CLCN3P51790 818 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PTENP60484 403 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 POLR2FP61218 127 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 FGFBP1Q14512 234 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ODF2Q5BJF6 829 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 C6orf10Q5SRN2 563 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PLPP4Q5VZY2 271 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ITPRIPL1Q6GPH6 555 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CYB5D1Q6P9G0 228 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 DCLRE1AQ6PJP8 1040 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 LCTLQ6UWM7 567 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SLC46A3Q7Z3Q1 461 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PEX26Q7Z412 305 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 RBM23Q86U06 439 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SLC25A41Q8N5S1 370 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ZNF366Q8N895 744 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TMEM174Q8WUU8 243 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 CUL5Q93034 780 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 XPO6Q96QU8 1125 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 TXLNGYQ9BZA5 131 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 UNC45AQ9H3U1 944 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 PNRC2Q9NPJ4 139 aaKnown RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 HAUS2Q9NVX0 235 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 KIAA1456Q9P272 454 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 SEL1LQ9UBV2 794 aa4.17□□□□□ -1.74
LINC00561-201ENST00000565815 ARMCX3Q9UH62 379 aaPredicted RBP4.17□□□□□ -1.74
LINC00561-201ENST00000565815 KIR2DS5A0A0G2JLQ3 304 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 DENND3A2RUS2 1198 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CCT8L1PA6NM43 557 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 FAM157AC9JC47 383 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 F8VZ95 297 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 J3KR12 359 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 KIR2DS3K7RE56 304 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 P4HA2O15460 535 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 BUB1O43683 1085 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 NDUFB8O95169 186 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CXCL14O95715 111 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 TOP3BO95985 862 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 SRD5A1P18405 259 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 UBA1P22314 1058 aaKnown RBP4.16□□□□□ -1.74
LINC00561-201ENST00000565815 ACSL1P33121 698 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 MMP13P45452 471 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 CYP4A11Q02928 519 aa4.16□□□□□ -1.74
LINC00561-201ENST00000565815 IFT88Q13099 833 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms