RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 C19orf47Q8N9M1 422 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 TMEM102Q8N9M5 508 aaPredicted RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 LMNTD1Q8N9Z9 388 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 GLIS1Q8NBF1 620 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DENND1AQ8TEH3 1009 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 SLC22A18Q96BI1 424 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 SGSM3Q96HU1 749 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 PANX3Q96QZ0 392 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 C17orf62Q9BQA9 187 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DPH2Q9BQC3 489 aaPredicted RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 SLAMF7Q9NQ25 335 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 CATSPERZQ9NTU4 200 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 DHCR7Q9UBM7 475 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 NDOR1Q9UHB4 597 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 RIMKLBQ9ULI2 386 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 TTC7AQ9ULT0 858 aaPredicted RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 PADI2Q9Y2J8 665 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 PTRH2Q9Y3E5 179 aaKnown RBP6.19□□□□□ -1.42
TCF4-228ENST00000565393 TCAF1Q9Y4C2 921 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 ZNF451Q9Y4E5 1061 aa6.19□□□□□ -1.42
TCF4-228ENST00000565393 GOLGA8KD6RF30 607 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 GOLGA8TH3BQL2 631 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 PRMT5O14744 637 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 PFDN6O15212 129 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ZSCAN9O15535 394 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 HCRTR1O43613 425 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 DPM1O60762 260 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 FGGP02679 453 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CAPN1P07384 714 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CTSBP07858 339 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CCDC175P0C221 793 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 MSL3P1P0C860 447 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 PIM1P11309 404 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 MGAT1P26572 445 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 AOAHP28039 575 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 NMBRP28336 390 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CXCR5P32302 372 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 TTPAP49638 278 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 RAB28P51157 221 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ARSFP54793 590 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 SARNPP82979 210 aaKnown RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 ACVR1Q04771 509 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ATP1A4Q13733 1029 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 SLC9A5Q14940 896 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 NCF4Q15080 339 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 TRIP13Q15645 432 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 KCTD19Q17RG1 926 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 NKAIN1Q4KMZ8 207 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ZNF789Q5FWF6 425 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ZC3H12BQ5HYM0 836 aaKnown RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 CES3Q6UWW8 571 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 TTLL10Q6ZVT0 673 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ZNF534Q76KX8 674 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 OTOAQ7RTW8 1153 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 TAX1BP1Q86VP1 789 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 RAB43Q86YS6 212 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 SLC22A15Q8IZD6 547 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CLEC1AQ8NC01 280 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 FDCSPQ8NFU4 85 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 CPT1CQ8TCG5 803 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 PEX13Q92968 403 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 RAD51AP1Q96B01 352 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 PTERQ96BW5 349 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 FER1L6-AS2Q96M78 137 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 FOPNLQ96NB1 174 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 IP6K3Q96PC2 410 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 IL17FQ96PD4 163 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 DHRS4Q9BTZ2 278 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 IL22Q9GZX6 179 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 LRRC4CQ9HCJ2 640 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 HOMER3Q9NSC5 361 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 INTS7Q9NVH2 962 aaKnown RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 EURLQ9NYK6 297 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 MARCH4Q9P2E8 410 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 GNPTGQ9UJJ9 305 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 TSR3Q9UJK0 312 aaKnown RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 PCDHGA9Q9Y5G4 932 aaKnown RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 ANKRD11Q6UB99 2663 aaPredicted RBP6.18□□□□□ -1.42
TCF4-228ENST00000565393 ZFYVE26Q68DK2 2539 aa6.18□□□□□ -1.42
TCF4-228ENST00000565393 ATRXP46100 2492 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 ZZEF1O43149 2961 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 MAGEB16A2A368 324 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 NRDCO43847 1150 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 AVILO75366 819 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 GPC4O75487 556 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 KLF7O75840 302 aaPredicted RBP6.17□□□□□ -1.42
TCF4-228ENST00000565393 SLCO2B1O94956 709 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 C1orf105O95561 183 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 S1PR4O95977 384 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 IGHEP01854 428 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 EIF2S1P05198 315 aaKnown RBP6.17□□□□□ -1.42
TCF4-228ENST00000565393 PAMP19021 973 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 MAGP20916 626 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 GNLYP22749 145 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 GABRA4P48169 554 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 VPS41P49754 854 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 EIF3BP55884 814 aaKnown RBP6.17□□□□□ -1.42
TCF4-228ENST00000565393 GPS1Q13098 491 aa6.17□□□□□ -1.42
TCF4-228ENST00000565393 TSTA3Q13630 321 aaPredicted RBP6.17□□□□□ -1.42
TCF4-228ENST00000565393 INPP5JQ15735 1006 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms