RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CATSPERZQ9NTU4 200 aa14.2□□□□□ -0.14
USB1-210ENST00000565151 RUVBL2Q9Y230 463 aaKnown RBP14.2□□□□□ -0.14
USB1-210ENST00000565151 NEU2Q9Y3R4 380 aa14.2□□□□□ -0.14
USB1-210ENST00000565151 NFS1Q9Y697 457 aa14.2□□□□□ -0.14
USB1-210ENST00000565151 QSOX1O00391 747 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 PRICKLE3O43900 615 aaPredicted RBP14.19□□□□□ -0.14
USB1-210ENST00000565151 CNOT3O75175 753 aaKnown RBP14.19□□□□□ -0.14
USB1-210ENST00000565151 TMEM63AO94886 807 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 CBSLP0DN79 551 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 PKLRP30613 574 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 CBSP35520 551 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 CSRP3P50461 194 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 ITGA1P56199 1179 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 KCNC4Q03721 635 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 IGFBP7Q16270 282 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 KYNUQ16719 465 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 SYTL3Q4VX76 610 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 LRRC8BQ6P9F7 803 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 NLRP9Q7RTR0 991 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 SYTL1Q8IYJ3 562 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 DNAJC22Q8N4W6 341 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 C19orf47Q8N9M1 422 aaKnown RBP14.19□□□□□ -0.14
USB1-210ENST00000565151 CPT1BQ92523 772 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 BIRC8Q96P09 236 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 CLMPQ9H6B4 373 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 ACTR5Q9H9F9 607 aaPredicted RBP14.19□□□□□ -0.14
USB1-210ENST00000565151 IL1RAPL1Q9NZN1 696 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 OR6C2Q9NZP2 312 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 ZKSCAN5Q9Y2L8 839 aa14.19□□□□□ -0.14
USB1-210ENST00000565151 GOLGA6L6A8MZA4 724 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 PRMT5O14744 637 aaPredicted RBP14.18□□□□□ -0.14
USB1-210ENST00000565151 NRP2O60462 931 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 GAS8O95995 478 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 TPSB2P20231 275 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 CASRP41180 1078 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 PTGIRP43119 386 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 MAGEA6P43360 314 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 GCGRP47871 477 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 NPY2RP49146 381 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 VPS41P49754 854 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 YBX1P67809 324 aaKnown RBP14.18□□□□□ -0.14
USB1-210ENST00000565151 TPSAB1Q15661 275 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 LACTB2Q53H82 288 aaPredicted RBP14.18□□□□□ -0.14
USB1-210ENST00000565151 ZNF449Q6P9G9 518 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 SYVN1Q86TM6 617 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 REXO1L1PQ8IX06 675 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 RASGEF1CQ8N431 466 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 ZBTB2Q8N680 514 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 TRIM58Q8NG06 486 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 CFAP61Q8NHU2 1237 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 CLIP3Q96DZ5 547 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 NLNQ9BYT8 704 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 IL22Q9GZX6 179 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 CHRNA10Q9GZZ6 450 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 SLC22A11Q9NSA0 550 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 POLG2Q9UHN1 485 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 TCFL5Q9UL49 500 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 SOX13Q9UN79 622 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 MAN2B2Q9Y2E5 1009 aa14.18□□□□□ -0.14
USB1-210ENST00000565151 A0A0J9YY10 115 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 KLF7O75840 302 aaPredicted RBP14.17□□□□□ -0.14
USB1-210ENST00000565151 VAPBO95292 243 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 RAB40ALP0C0E4 278 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 ITGAXP20702 1163 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 CYP2A7P20853 494 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 RPS15P62841 145 aaKnown RBP14.17□□□□□ -0.14
USB1-210ENST00000565151 GBX1Q14549 363 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 DNAJC21Q5F1R6 531 aaKnown RBP14.17□□□□□ -0.14
USB1-210ENST00000565151 FCRL6Q6DN72 434 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 TCTN3Q6NUS6 607 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 GSTA5Q7RTV2 222 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 TAX1BP1Q86VP1 789 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 DENND1AQ8TEH3 1009 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 COG1Q8WTW3 980 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 LPGAT1Q92604 370 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.17□□□□□ -0.14
USB1-210ENST00000565151 TCTN2Q96GX1 697 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 SYNPO2LQ9H987 977 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 SYTL2Q9HCH5 934 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 MLXIPLQ9NP71 852 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 SERTAD3Q9UJW9 196 aa14.17□□□□□ -0.14
USB1-210ENST00000565151 PRRC2CQ9Y520 2896 aaKnown RBP14.16□□□□□ -0.14
USB1-210ENST00000565151 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.16□□□□□ -0.14
USB1-210ENST00000565151 ARGFXA6NJG6 315 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 ISM1B1AKI9 464 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 E7EQ34 232 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 MASP2O00187 686 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 NIPSNAP2O75323 286 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 RFPL1O75677 317 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 MED26O95402 600 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 MAGP20916 626 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 CD9P21926 228 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 RPS3P23396 243 aaKnown RBP eCLIP14.16□□□□□ -0.14
USB1-210ENST00000565151 BDKRB1P46663 353 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 TTPAP49638 278 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 RAB28P51157 221 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 FOXK1P85037 733 aa14.16□□□□□ -0.14
USB1-210ENST00000565151 PLOD1Q02809 727 aaPredicted RBP14.16□□□□□ -0.14
USB1-210ENST00000565151 SRSF1Q07955 248 aaKnown RBP eCLIP14.16□□□□□ -0.14
USB1-210ENST00000565151 GPS1Q13098 491 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms