RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 NCKIPSDQ9NZQ3 722 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 CD274Q9NZQ7 290 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PILRBQ9UKJ0 227 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PSMD13Q9UNM6 376 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 PDE10AQ9Y233 779 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 RAXQ9Y2V3 346 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 NAV2Q8IVL1 2488 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 ATMQ13315 3056 aa10.81□□□□□ -0.68
SF3B3-205ENST00000564899 URB1O60287 2271 aaKnown RBP10.81□□□□□ -0.68
SF3B3-205ENST00000564899 MGAQ8IWI9 3026 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 PTPRBP23467 1997 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 A0A1B0GTW7 788 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 PRR19A6NJB7 356 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ARHGEF33A8MVX0 844 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 FFAR2O15552 330 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 KLK8O60259 260 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 TRIM13O60858 407 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 H2AFYO75367 372 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 IPO13O94829 963 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 GUCA1CO95843 209 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 SERPINE1P05121 402 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 HIST1H2AGP0C0S8 130 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 MTHFD2P13995 350 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 CTSEP14091 401 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 JUNDP17535 347 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 HIST1H2ADP20671 130 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 AK4P27144 223 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 RPL10P27635 214 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ACADLP28330 430 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 LSP1P33241 339 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 RPIAP49247 311 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 CSNK1EP49674 416 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 DNAJB13P59910 316 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 CBX1P83916 185 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 PFKFB4Q16877 469 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 PEAR1Q5VY43 1037 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ATG16L1Q676U5 607 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 UNC5DQ6UXZ4 953 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 RGS9BPQ6ZS82 235 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ZCCHC23Q6ZST2 131 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 RASGRP3Q8IV61 690 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 MINDY1Q8N5J2 469 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 SPDYE1Q8NFV5 336 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 CCL4L1Q8NHW4 92 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 RAB3IL1Q8TBN0 382 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 MCOLN3Q8TDD5 553 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ZNF75CPQ92670 426 aaPredicted RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 HIST1H2AHQ96KK5 128 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 HIST1H2AJQ99878 128 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 EGFL8Q99944 293 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 H2AFJQ9BTM1 129 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 NUSAP1Q9BXS6 441 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 GSDMCQ9BYG8 508 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ZDHHC5Q9C0B5 715 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 SLC32A1Q9H598 525 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 MANSC1Q9H8J5 431 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 CAPN10Q9HC96 672 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 DNAJC28Q9NX36 388 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ARL15Q9NXU5 204 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 SUSD2Q9UGT4 822 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 APOBEC3BQ9UH17 382 aaKnown RBP10.8□□□□□ -0.68
SF3B3-205ENST00000564899 KLF15Q9UIH9 416 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ASF1AQ9Y294 204 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 WDR37Q9Y2I8 494 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 ST14Q9Y5Y6 855 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 PIKFYVEQ9Y2I7 2098 aa10.8□□□□□ -0.68
SF3B3-205ENST00000564899 A0A1B0GVT2 93 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 TCP11X1B4DZS4 312 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 STX16O14662 325 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 KLF11O14901 512 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 SH3BP5O60239 455 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 C1orf105O95561 183 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CSF2P04141 144 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 RPN2P04844 631 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 ANXA5P08758 320 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 NME1P15531 152 aaKnown RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 GRK2P25098 689 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 HALP42357 657 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 ALDH18A1P54886 795 aaKnown RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 AP1S2P56377 157 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CDKL1Q00532 357 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 BST1Q10588 318 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 SULT1C3Q6IMI6 304 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CAPRIN2Q6IMN6 1127 aaKnown RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 TTC23LQ6PF05 361 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 SLC30A9Q6PML9 568 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 MBOAT1Q6ZNC8 495 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 NRROSQ86YC3 692 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CCNYL1Q8N7R7 359 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 PDPRQ8NCN5 879 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 GPBAR1Q8TDU6 330 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 TFGQ92734 400 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 C12orf66Q96MD2 445 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 TMEM237Q96Q45 408 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 INSM2Q96T92 566 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 GATA5Q9BWX5 397 aaPredicted RBP10.79□□□□□ -0.68
SF3B3-205ENST00000564899 CAAP1Q9H8G2 361 aa10.79□□□□□ -0.68
SF3B3-205ENST00000564899 PRDM8Q9NQV8 689 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms