RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 DENND6BQ8NEG7 585 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 OR2T34Q8NGX1 318 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 OR2T11Q8NH01 316 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 APOOQ9BUR5 198 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 SGK2Q9HBY8 427 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ITM2CQ9NQX7 267 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 SLC23A2Q9UGH3 650 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ZNHIT2Q9UHR6 403 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 MEI4A8MW99 385 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 PEX11AO75192 247 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ULK1O75385 1050 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 SLC16A8O95907 504 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 HOXC4P09017 264 aaPredicted RBP19.04■□□□□ 0.64
CLN6-205ENST00000564846 IMPA1P29218 277 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ACSL1P33121 698 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 HTR6P50406 440 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 DGKEP52429 567 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ABRAXAS2Q15018 415 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ATP6AP1LQ52LC2 224 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 Q6ZSR9 355 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 L3MBTL4Q8NA19 623 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 OR56A3Q8NH54 315 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 ZDHHC5Q9C0B5 715 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 GIMAP2Q9UG22 337 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 EYSQ5T1H1 3165 aa19.04■□□□□ 0.64
CLN6-205ENST00000564846 KRT87PA6NCN2 255 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 CHURC1-FNTBB4DL54 471 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 KRT6AP02538 564 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 KRT6BP04259 564 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 ITPKAP23677 461 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 KRT6CP48668 564 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 MRPL19P49406 292 aaKnown RBP19.03■□□□□ 0.64
CLN6-205ENST00000564846 ERVK-8P63133 956 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 SLC25A3Q00325 362 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 DMPKQ09013 629 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 GRIK2Q13002 908 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 NAE1Q13564 534 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 KIF19Q2TAC6 998 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 THOC6Q86W42 341 aaKnown RBP19.03■□□□□ 0.64
CLN6-205ENST00000564846 MYLK4Q86YV6 388 aaPredicted RBP19.03■□□□□ 0.64
CLN6-205ENST00000564846 MIER2Q8N344 545 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 FAM13CQ8NE31 585 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 OR9A1PQ8NGU1 263 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 HMGB4Q8WW32 186 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 TIMM29Q9BSF4 260 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 RASSF4Q9H2L5 321 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 FZD3Q9NPG1 666 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 SDR39U1Q9NRG7 319 aaPredicted RBP19.03■□□□□ 0.64
CLN6-205ENST00000564846 CCDC167Q9P0B6 97 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 KLQ9UEF7 1012 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 ACSL5Q9ULC5 683 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 MYO10Q9HD67 2058 aa19.03■□□□□ 0.64
CLN6-205ENST00000564846 SLC28A1O00337 649 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 RGS14O43566 566 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 UGDHO60701 494 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 KCNJ13O60928 360 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 CEACAM5P06731 702 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 CD1EP15812 388 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 GPX3P22352 226 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 STX5Q13190 355 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 RIPK1Q13546 671 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 LRRC32Q14392 662 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 AGKQ53H12 422 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 HABP4Q5JVS0 413 aaKnown RBP19.02■□□□□ 0.64
CLN6-205ENST00000564846 C6orf136Q5SQH8 315 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 GPR153Q6NV75 609 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 Q6ZS52 159 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 SYT13Q7L8C5 426 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 TRIM46Q7Z4K8 759 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 KYQ8NBH2 561 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 HMGCLL1Q8TB92 370 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 USP7Q93009 1102 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 GUCD1Q96NT3 240 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 UHRF1Q96T88 793 aaPredicted RBP19.02■□□□□ 0.64
CLN6-205ENST00000564846 EFCAB1Q9HAE3 211 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 CD93Q9NPY3 652 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 TM7SF3Q9NS93 570 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 USP36Q9P275 1121 aaKnown RBP19.02■□□□□ 0.64
CLN6-205ENST00000564846 SNX6Q9UNH7 406 aa19.02■□□□□ 0.64
CLN6-205ENST00000564846 MANBAO00462 879 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 FFAR3O14843 346 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 AIM2O14862 343 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 GPR42O15529 346 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 RPN2P04844 631 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 IL9P15248 144 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 ITGAXP20702 1163 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 PCDH1Q08174 1060 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 RPS6KA2Q15349 733 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 LIPJQ5W064 366 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 ZNF687Q8N1G0 1237 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 SFRP1Q8N474 314 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 ZNF480Q8WV37 535 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 MED8Q96G25 268 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 PPP3R2Q96LZ3 170 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 THTPAQ9BU02 230 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 SLC25A23Q9BV35 468 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 INTS7Q9NVH2 962 aaKnown RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 NDE1Q9NXR1 346 aa19.01■□□□□ 0.63
CLN6-205ENST00000564846 ZNF490Q9ULM2 529 aaPredicted RBP19.01■□□□□ 0.63
CLN6-205ENST00000564846 ASF1AQ9Y294 204 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms