RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 OR2A14Q96R47 310 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 SPHK1Q9NYA1 384 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC39A10Q9ULF5 831 aa17.75■□□□□ 0.43
SYNGR3-204ENST00000564642 TMEM150CB9EJG8 249 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 SCRG1O75711 98 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 PVRP15151 417 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 PGAM1P18669 254 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 IVDP26440 423 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 PKLRP30613 574 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 DLSTP36957 453 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 DHX9Q08211 1270 aaKnown RBP17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 KIR2DS3Q14952 304 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 BBS9Q3SYG4 887 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 ZNF789Q5FWF6 425 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 PCSK4Q6UW60 755 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 DENND6AQ8IWF6 608 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 RAB42Q8N4Z0 105 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 MAGEC3Q8TD91 643 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 N4BP2L2Q92802 583 aaPredicted RBP17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 RAD51AP1Q96B01 352 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 EBNA1BP2Q99848 306 aaKnown RBP17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 FAM167BQ9BTA0 163 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 NAT9Q9BTE0 207 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 LHX9Q9NQ69 397 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 FBXO6Q9NRD1 293 aaPredicted RBP17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 LATS2Q9NRM7 1088 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 SERTAD3Q9UJW9 196 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 CROTQ9UKG9 612 aa17.74■□□□□ 0.43
SYNGR3-204ENST00000564642 A0A0J9YY10 115 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 SMAPO00193 183 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TTI1O43156 1089 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 CPNE3O75131 537 aaKnown RBP17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TTC4O95801 387 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TCN2P20062 427 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 CD9P21926 228 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 CASQ1P31415 396 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 MC1RQ01726 317 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 MORF4L2Q15014 288 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 CNSTQ6PJW8 725 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TRIM73Q86UV7 250 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 KCNMB4Q86W47 210 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 PDIK1LQ8N165 341 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 ZBTB2Q8N680 514 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 C19orf47Q8N9M1 422 aaKnown RBP17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 EXTL1Q92935 676 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC22A18Q96BI1 424 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TCTN2Q96GX1 697 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TRIM51Q9BSJ1 452 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 RAB11FIP5Q9BXF6 653 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 IARS2Q9NSE4 1012 aaKnown RBP17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 CIDEBQ9UHD4 219 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 IL17BQ9UHF5 180 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 TSR3Q9UJK0 312 aaKnown RBP17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 KCND3Q9UK17 655 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 FBXO5Q9UKT4 447 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 PCDHB3Q9Y5E6 796 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 NFS1Q9Y697 457 aa17.73■□□□□ 0.43
SYNGR3-204ENST00000564642 LOC400499M0QZD8 3231 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 RASGRF2O14827 1237 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 KATNA1O75449 491 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 BANF1O75531 89 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 C1orf105O95561 183 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 PRB1P04280 392 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 MSL3P1P0C860 447 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 ATP5DP30049 168 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 CCNFP41002 786 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC1A2P43004 574 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 LY6DQ14210 128 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 CRYMQ14894 314 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC5A12Q1EHB4 618 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 TTLL9Q3SXZ7 439 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 MSS51Q4VC12 460 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 HSP90AA5PQ58FG0 334 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 SPANXN3Q5MJ09 141 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 C2orf73Q8N5S3 287 aaPredicted RBP17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 OR2L8Q8NGY9 312 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 STARD8Q92502 1023 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 CLIP3Q96DZ5 547 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 CATSPER2Q96P56 530 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 IL17FQ96PD4 163 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 KRT12Q99456 494 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 TRIM31Q9BZY9 425 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 SLC7A5P2Q9GIP4 190 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 GALPQ9UBC7 116 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 COMMD10Q9Y6G5 202 aa17.72■□□□□ 0.43
SYNGR3-204ENST00000564642 EFCAB8A8MWE9 144 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 FANCGO15287 622 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 NKX2-8O15522 239 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 KLK3P07288 261 aaPredicted RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 F7P08709 466 aaPredicted RBP17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 PRKAR1AP10644 381 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 CYP2A7P20853 494 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 BDKRB1P46663 353 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 ITGA8P53708 1063 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 GRB7Q14451 532 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 GBX1Q14549 363 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 TBR1Q16650 682 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 LINC00303Q3SY05 128 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 ACSBG2Q5FVE4 666 aa17.71■□□□□ 0.43
SYNGR3-204ENST00000564642 HIBCHQ6NVY1 386 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms