RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 SLC2A4P14672 509 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 ATP5F1P24539 256 aaPredicted RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 AP1S2P56377 157 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 NFKB2Q00653 900 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 IL9RQ01113 521 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 PCLAFQ15004 111 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 TCEA2Q15560 299 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 RPE65Q16518 533 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 TRIM61Q5EBN2 209 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 GKAP1Q5VSY0 366 aaPredicted RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 TTC23LQ6PF05 361 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 IYDQ6PHW0 289 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 DCUN1D3Q8IWE4 304 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 TBC1D21Q8IYX1 336 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 PDPRQ8NCN5 879 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 OR5K2Q8NHB8 316 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 PAIP2Q9BPZ3 127 aaKnown RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 ARRDC1-AS1Q9H2J1 176 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 TRIT1Q9H3H1 467 aaKnown RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
SPG7-209ENST00000564047 UTP6Q9NYH9 597 aaKnown RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 SCHIP1Q9P0W5 487 aaPredicted RBP12.57□□□□□ -0.4
SPG7-209ENST00000564047 LRP4O75096 1905 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 KIR2DS5A0A0G2JLQ3 304 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 A0A0G2JNG1 304 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 A8MT66 165 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 PATE3B3GLJ2 98 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 KIR2DS3K7RE56 304 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 UBXN8O00124 270 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 ARHGAP33O14559 1287 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 YY2O15391 372 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 IPO13O94829 963 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 S100BP04271 92 aaPredicted RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 ANXA6P08133 673 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 ANXA5P08758 320 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 MTHFD1P11586 935 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 GFAPP14136 432 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 NDUFS1P28331 727 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 ALDH3A1P30838 453 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 BDKRB1P46663 353 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 PRKAA2P54646 552 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 ASPHQ12797 758 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 KIR2DS5Q14953 304 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 SHBQ15464 509 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 HLA-BQ31612 363 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 AASDHQ4L235 1098 aaPredicted RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 PLA2G2CQ5R387 149 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 CPLX4Q7Z7G2 160 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 CACNA2D3Q8IZS8 1091 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 TCAIMQ8N3R3 496 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 FBXO39Q8N4B4 442 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 FAM46DQ8NEK8 389 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 SREK1Q8WXA9 508 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 EXT2Q93063 718 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 RAD51AP1Q96B01 352 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 SEC16BQ96JE7 1060 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 CCDC138Q96M89 665 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 FERD3LQ96RJ6 166 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 NUSAP1Q9BXS6 441 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 RABEP2Q9H5N1 569 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 IMP3Q9NV31 184 aaKnown RBP12.56□□□□□ -0.4
SPG7-209ENST00000564047 OXSMQ9NWU1 459 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 ARL15Q9NXU5 204 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 CD274Q9NZQ7 290 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 SIRPGQ9P1W8 387 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 POLG2Q9UHN1 485 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 COLEC10Q9Y6Z7 277 aa12.56□□□□□ -0.4
SPG7-209ENST00000564047 PIKFYVEQ9Y2I7 2098 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 NEMP2A6NFY4 417 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 OR52A4PA6NMU1 304 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 STX16-NPEPL1H3BU86 382 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 STX16O14662 325 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 KHNYNO15037 678 aaKnown RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 TRIM13O60858 407 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 SDC3O75056 442 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 CER1O95813 267 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 GUCA1CO95843 209 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 XRCC1P18887 633 aaPredicted RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 EPHA8P29322 1005 aaPredicted RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 HNMTP50135 292 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 LIMK1P53667 647 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 ALDH18A1P54886 795 aaKnown RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 DNAJB13P59910 316 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 BNIP3Q12983 259 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 KRT33BQ14525 404 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 SETDB1Q15047 1291 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 PFKFB4Q16877 469 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 CCSMST1Q4G0I0 132 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 LIPMQ5VYY2 423 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 SULT1C3Q6IMI6 304 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 OGFOD3Q6PK18 319 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 RAB44Q7Z6P3 723 aaPredicted RBP12.55□□□□□ -0.4
SPG7-209ENST00000564047 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
SPG7-209ENST00000564047 C10orf107Q8IVU9 208 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms