RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 AKIP1Q9NQ31 210 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 TREX1Q9NSU2 369 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 SAMHD1Q9Y3Z3 626 aaKnown RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 DGKBQ9Y6T7 804 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 FAM234BA2RU67 622 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 K7ERQ8 282 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 KDELR3O43731 214 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 FTH1P02794 183 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 CYP2A6P11509 494 aaPredicted RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 ELK4P28324 431 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 IFNA8P32881 189 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 POLR2IP36954 125 aaKnown RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 ARPC4P59998 168 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 MAPK11Q15759 364 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 C6orf136Q5SQH8 315 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 DENND5AQ6IQ26 1287 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 HID1Q8IV36 788 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 PIK3C3Q8NEB9 887 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 OR7A2PQ8NGA2 310 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 C3orf30Q96M34 536 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 GPR78Q96P69 363 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 MTERF1Q99551 399 aaKnown RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 FUNDC2Q9BWH2 189 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 RASSF1Q9NS23 344 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 NLE1Q9NVX2 485 aaPredicted RBP10.24□□□□□ -0.77
RNF40-204ENST00000563683 PTPRFP10586 1907 aa10.24□□□□□ -0.77
RNF40-204ENST00000563683 A0A1W2PQ45 241 aaPredicted RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 A0A1W2PQY0 241 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 C2orf78A6NCI8 922 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CCL16O15467 120 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LDB2O43679 373 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 PCDH8O95206 1070 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 TGM1P22735 817 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 KIR3DL1P43629 444 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 INPP1P49441 399 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 GABARAPL2P60520 117 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CHIT1Q13231 466 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 PTGR1Q14914 329 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 MPPE1Q53F39 396 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 COQ5Q5HYK3 327 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 SYVN1Q86TM6 617 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 AKAP14Q86UN6 197 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CMTM8Q8IZV2 173 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 FAM110BQ8TC76 370 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 GSTO2Q9H4Y5 243 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ENPP5Q9UJA9 477 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 GMPPBQ9Y5P6 360 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 SLC22A1O15245 554 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 FKTNO75072 461 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 JRKO75564 520 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 THRBP10828 461 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 MYCLP1P12525 358 aaPredicted RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 PRDX3P30048 256 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 OXTRP30559 389 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 S100A5P33763 92 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CSTF3Q12996 717 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 SPCS2Q15005 226 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CST9Q5W186 159 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 XAF1Q6GPH4 301 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 AADATQ8N5Z0 425 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 PAPD5Q8NDF8 572 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 KLHDC9Q8NEP7 349 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 TRPV1Q8NER1 839 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ZNF461Q8TAF7 563 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 REXO5Q96IC2 774 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 ITCHQ96J02 903 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CPNE5Q9HCH3 593 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 FER1L6Q2WGJ9 1857 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LINC00854A0A1B0GVQ3 168 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LOC730098B7Z3J9 87 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 GPX3P22352 226 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CASP9P55211 416 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CBX2Q14781 532 aaPredicted RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 PTPRRQ15256 657 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LYPLAL1Q5VWZ2 237 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LARP4Q71RC2 724 aaKnown RBP eCLIP10.23□□□□□ -0.77
RNF40-204ENST00000563683 HOMEZQ8IX15 550 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 SPARTQ8N0X7 666 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 DACT3Q96B18 629 aaPredicted RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 ADPRHL2Q9NX46 363 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 TRPC4Q9UBN4 977 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 VPS51Q9UID3 782 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 RGS5O15539 181 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ASNA1O43681 348 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 UGT2B11O75310 529 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CRHBPP24387 322 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 MLLT10P55197 1068 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 RING1Q06587 406 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 LAPTM5Q13571 262 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 SULT1C3Q6IMI6 304 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 R3HCC1LQ7Z5L2 792 aaKnown RBP10.23□□□□□ -0.77
RNF40-204ENST00000563683 SNX20Q7Z614 316 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 RETREG3Q86VR2 466 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 PIANPQ8IYJ0 282 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ZNF366Q8N895 744 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 ZNF540Q8NDQ6 660 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 OR9Q1Q8NGQ5 310 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 RDH12Q96NR8 316 aa10.23□□□□□ -0.77
RNF40-204ENST00000563683 CSF3RQ99062 836 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms