RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 A0A1B0GX78 115 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 FOXO6A8MYZ6 492 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 PES1O00541 588 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 PMPCBO75439 489 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 PRAMEF1O95521 474 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 POLBP06746 335 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 CELA2AP08217 269 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 UGT2B7P16662 529 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 SLC10A2Q12908 348 aaPredicted RBP7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 PCOLCEQ15113 449 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 CEBPEQ15744 281 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 BCL7AQ4VC05 210 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 TCP11X2Q5H9J9 407 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 FNBP1LQ5T0N5 605 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 TAOK1Q7L7X3 1001 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 FGD2Q7Z6J4 655 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 TMEM200AQ86VY9 491 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 AMIGO1Q86WK6 493 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 DOLPP1Q86YN1 238 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 KBTBD2Q8IY47 623 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 MARVELD2Q8N4S9 558 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 DNAAF3Q8N9W5 541 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 AGAP11Q8TF27 550 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 CA5BP1Q8WTZ4 195 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 SDCCAG3Q96C92 435 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 C8orf44Q96CB5 159 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 IMP4Q96G21 291 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 MAGED4Q96JG8 741 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 ZNF559Q9BR84 538 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 ZCCHC2Q9C0B9 1178 aaKnown RBP7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 OR52A5Q9H2C5 316 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 XKR8Q9H6D3 395 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 CBX8Q9HC52 389 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 ENAMQ9NRM1 1142 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 SPHK1Q9NYA1 384 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 TAB2Q9NYJ8 693 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 IL17CQ9P0M4 197 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 KCNN3Q9UGI6 736 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 PLCL2Q9UPR0 1127 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 ICKQ9UPZ9 632 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 ASB1Q9Y576 335 aa7.39□□□□□ -1.23
HERPUD1-206ENST00000563343 KLHL33A6NCF5 533 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 ASPDHA6ND91 283 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 OR5H15A6NDH6 313 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 E9PLN8 166 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 KCNK1O00180 336 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 DSCR3O14972 297 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 PROM1O43490 865 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 GADD45BO75293 160 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 TOXO94900 526 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 BMP10O95393 424 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 MED26O95402 600 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 SERPINA7P05543 415 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 HOXD4P09016 255 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 TPBGLP0DKB5 382 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 ALAS2P22557 587 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 FDXRP22570 491 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 MSX1P28360 303 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 PEBP1P30086 187 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 SPAM1P38567 509 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 IFI35P80217 286 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 GBE1Q04446 702 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 KLC1Q07866 573 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 NOMO1Q15155 1222 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 SYCP1Q15431 976 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 SLC14A2Q15849 920 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 TPD52L1Q16890 204 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 KRTCAP3Q53RY4 240 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 CCDC183Q5T5S1 534 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 HIBCHQ6NVY1 386 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 FAM151BQ6UXP7 276 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 TTLL10Q6ZVT0 673 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 DET1Q7L5Y6 550 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 IRF2BP2Q7Z5L9 587 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 SIAH3Q8IW03 269 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 DTWD1Q8N5C7 304 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 MLKLQ8NB16 471 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 PHC3Q8NDX5 983 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 HM13Q8TCT9 377 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 CPLX3Q8WVH0 158 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 N4BP2L2Q92802 583 aaPredicted RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 ALPK1Q96QP1 1244 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 FERD3LQ96RJ6 166 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 VKORC1Q9BQB6 163 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 TRIM51Q9BSJ1 452 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 PRR14Q9BWN1 585 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.38□□□□□ -1.232e-8■■■□□ 18.7
HERPUD1-206ENST00000563343 HAUS2Q9NVX0 235 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 FANCLQ9NW38 375 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 EURLQ9NYK6 297 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 FAM8A1Q9UBU6 413 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 NXT1Q9UKK6 140 aaKnown RBP7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 ARHGAP21Q5T5U3 1957 aa7.38□□□□□ -1.23
HERPUD1-206ENST00000563343 IGHV1-45A0A0A0MS14 117 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 A0A0J9YY10 115 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 NKX2-6A6NCS4 301 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 TMCO5BA8MYB1 307 aa7.37□□□□□ -1.23
HERPUD1-206ENST00000563343 MAP2K7O14733 419 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms