RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 POC1AQ8NBT0 407 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 UXS1Q8NBZ7 420 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 OR5M8Q8NGP6 311 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 SPATA20Q8TB22 786 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 HEXDCQ8WVB3 486 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 NSMAFQ92636 917 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 PTP4A1Q93096 173 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 NEK1Q96PY6 1258 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 CPNE1Q99829 537 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 FUT8Q9BYC5 575 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 RETREG1Q9H6L5 497 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 HHATLQ9HCP6 504 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 PIH1D3Q9NQM4 214 aaKnown RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 MIOSQ9NXC5 875 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 PTTG2Q9NZH5 202 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 NPAP1Q9NZP6 1156 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 AKAP7Q9P0M2 348 aaPredicted RBP3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 YIPF1Q9Y548 306 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 IGSF1Q8N6C5 1336 aa3.08□□□□□ -1.92
SHCBP1-202ENST00000563219 HTR3EA5X5Y0 456 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 PI4K2BG5E9Z4 385 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 TSPAN1O60635 241 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 PDE9AO76083 593 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 BMP10O95393 424 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 GCNT3O95395 438 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 MOCS3O95396 460 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ZFYP08048 801 aaPredicted RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 OR2T7P0C7T2 308 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SMIM18P0DKX4 95 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ACP2P11117 423 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 CD22P20273 847 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 MTHFRP42898 656 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 RGS19P49795 217 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 MLLT10P55197 1068 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 NME5P56597 212 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 UBASH3AP57075 661 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 DMPKQ09013 629 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SMU1Q2TAY7 513 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF672Q499Z4 452 aaPredicted RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ODF2Q5BJF6 829 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 GCNT6Q5T4J0 391 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 STXBP5Q5T5C0 1151 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 GFI1BQ5VTD9 330 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SFMBT2Q5VUG0 894 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 FAM171BQ6P995 826 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 MOXD1Q6UVY6 613 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 PLXDC2Q6UX71 529 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 GSG1LQ6UXU4 331 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 C11orf57Q6ZUT1 292 aaPredicted RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 C9orf139Q6ZV77 190 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 TMPRSS11BQ86T26 416 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ZSCAN30Q86W11 494 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 DZIP1Q86YF9 867 aaKnown RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 UNC45BQ8IWX7 931 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 RDM1Q8NG50 284 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 EXD1Q8NHP7 514 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 FIBINQ8TAL6 211 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SMPDL3BQ92485 455 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 DAZLQ92904 295 aaKnown RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SLAMF9Q96A28 289 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 MTERF3Q96E29 417 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 ABHD8Q96I13 439 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 CABS1Q96KC9 395 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 RMDN2Q96LZ7 410 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 UTP14AQ9BVJ6 771 aaKnown RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 CACNG6Q9BXT2 260 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 TBC1D7Q9P0N9 293 aa3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 SPIN1Q9Y657 262 aaPredicted RBP3.07□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A0G2JNG1 304 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A1W2PRV1 198 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 HYKKA2RU49 373 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ERVV-2B6SEH9 535 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 C16orf97H3BN30 126 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 RTCAO00442 366 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ZNF263O14978 683 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 BUB3O43684 328 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 SYNGR3O43761 229 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ABCC9O60706 1549 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 KERAO60938 352 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 NME6O75414 186 aaPredicted RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MED24O75448 989 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 IGHV4-39P01824 125 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 MT-ND3P03897 115 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 RLN1P04808 185 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 VIMP08670 466 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 RAB40ALP0C0E4 278 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 CSF2RAP15509 400 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 AMD1P17707 334 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 GNAZP19086 355 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 JAK1P23458 1154 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 WNT5AP41221 380 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 HOXA1P49639 335 aaPredicted RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 DLX5P56178 289 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 PTENP60484 403 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 POLR2LP62875 67 aaKnown RBP3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 KIR2DS5Q14953 304 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ACCSLQ4AC99 568 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ANKRD20A4Q4UJ75 823 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 ANKRD20A8PQ5CZ79 823 aa3.06□□□□□ -1.92
SHCBP1-202ENST00000563219 LRRC73Q5JTD7 316 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms