RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 CA12O43570 354 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 PCDH7O60245 1069 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CD48P09326 243 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 LINGO3P0C6S8 592 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ARCN1P48444 511 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 HYAL2Q12891 473 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CEP97Q8IW35 865 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 Q8N9G6 341 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 LPIN3Q9BQK8 851 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 YIPF4Q9BSR8 244 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 RIOK2Q9BVS4 552 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 DHX33Q9H6R0 707 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 INSL6Q9Y581 213 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 PCDHGB7Q9Y5F8 929 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 DUXAA6NLW8 204 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CXCR6O00574 342 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 PCDHGA12O60330 932 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CDKN1CP49918 316 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NRLP54845 237 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 TNFAIP8L3Q5GJ75 292 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF627Q7L945 461 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 LINGO2Q7L985 606 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NUDT13Q86X67 352 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 OR2L8Q8NGY9 312 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CYB5D2Q8WUJ1 264 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CLPTM1LQ96KA5 538 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 MED28Q9H204 178 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SUV39H2Q9H5I1 410 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 S100A14Q9HCY8 104 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 BRD7Q9NPI1 651 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CACNG4Q9UBN1 327 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF639Q9UID6 485 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 COMMD3-BMI1R4GMX3 469 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 DIP2CQ9Y2E4 1556 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NEMP2A6NFY4 417 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 A8MUI8 341 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 AKAP8O43823 692 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 EIF2S3P41091 472 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 AKR1D1P51857 326 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 TLE2Q04725 743 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 RFTN1Q14699 578 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ARHGAP40Q5TG30 622 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 LMX1AQ8TE12 382 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SLC39A3Q9BRY0 314 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ERVK-5Q9HDB9 667 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ZNF536O15090 1300 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 A0A1W2PRB8 838 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NRP1O14786 923 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NCK1P16333 377 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 MAP3K8P41279 467 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SNTA1Q13424 505 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CCINQ13939 588 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 DEFB119Q8N690 84 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 PNLDC1Q8NA58 520 aaKnown RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 TBX5Q99593 518 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 BTBD1Q9H0C5 482 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SMPD3Q9NY59 655 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CDH22Q9UJ99 828 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SOWAHBA6NEL2 793 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CSNK2A2P19784 350 aaPredicted RBP11.04□□□□□ -0.64
RPAP1-204ENST00000562303 ENPP2Q13822 863 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 SLC5A9Q2M3M2 681 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 CAMKVQ8NCB2 501 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 UFD1Q92890 307 aa11.04□□□□□ -0.64
RPAP1-204ENST00000562303 NDUFS4O43181 175 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 RPS9P46781 194 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 PER3P56645 1201 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SLBPQ14493 270 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 GPR68Q15743 365 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 FSTL4Q6MZW2 842 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 RAB43Q86YS6 212 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 PGAM4Q8N0Y7 254 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CELF5Q8N6W0 485 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ZSCAN4Q8NAM6 433 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 PROKR2Q8NFJ6 384 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 COPS4Q9BT78 406 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 OR14I1A6ND48 311 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 KHNYNO15037 678 aaKnown RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ARRB1P49407 418 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 EVX2Q03828 476 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 FAM174BQ3ZCQ3 159 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CNTD1Q8N815 330 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SCAMP5Q8TAC9 235 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SEC61A2Q9H9S3 476 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SLC7A4O43246 635 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 PTX3P26022 381 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 SEPHS1P49903 392 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 BTN3A2P78410 334 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ARFRP1Q13795 201 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 IDNKQ5T6J7 187 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 GKN2Q86XP6 184 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 ZDHHC21Q8IVQ6 265 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CLIP4Q8N3C7 705 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 HPS1Q92902 700 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 FUBP3Q96I24 572 aaKnown RBP eCLIP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 CYP2S1Q96SQ9 504 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 NMUR2Q9GZQ4 415 aa11.03□□□□□ -0.64
RPAP1-204ENST00000562303 FAM124BQ9H5Z6 455 aaPredicted RBP11.03□□□□□ -0.64
RPAP1-204ENST00000562303 MEMO1Q9Y316 297 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms