RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 PPM1NQ8N819 430 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 MAGEC3Q8TD91 643 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 AENQ8WTP8 325 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 LCN9Q8WX39 176 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ZDHHC12Q96GR4 267 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 AHCYL2Q96HN2 611 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 ELMO2Q96JJ3 720 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 SLC41A2Q96JW4 573 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 FOPNLQ96NB1 174 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 RAB11FIP5Q9BXF6 653 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 SLC12A9Q9BXP2 914 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 SRMSQ9H3Y6 488 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 ENAMQ9NRM1 1142 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 NOVA2Q9UNW9 492 aaKnown RBP13.01□□□□□ -0.33
CDH1-204ENST00000562118 PCM1Q15154 2024 aa13.01□□□□□ -0.33
CDH1-204ENST00000562118 A0A087WUV0 522 aaPredicted RBP13□□□□□ -0.33
CDH1-204ENST00000562118 A0A1W2PPV9 198 aa13□□□□□ -0.33
CDH1-204ENST00000562118 OR6C74A6NCV1 312 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CDRT15L2A8MXV6 281 aa13□□□□□ -0.33
CDH1-204ENST00000562118 B4E171 279 aa13□□□□□ -0.33
CDH1-204ENST00000562118 FKBP9O95302 570 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CATP04040 527 aaKnown RBP13□□□□□ -0.33
CDH1-204ENST00000562118 CHRM5P08912 532 aaPredicted RBP13□□□□□ -0.33
CDH1-204ENST00000562118 AMD1P17707 334 aa13□□□□□ -0.33
CDH1-204ENST00000562118 SLC26A3P40879 764 aa13□□□□□ -0.33
CDH1-204ENST00000562118 TSPAN7P41732 249 aa13□□□□□ -0.33
CDH1-204ENST00000562118 BDKRB1P46663 353 aa13□□□□□ -0.33
CDH1-204ENST00000562118 RGS4P49798 205 aa13□□□□□ -0.33
CDH1-204ENST00000562118 PGGT1BP53609 377 aa13□□□□□ -0.33
CDH1-204ENST00000562118 IL2P60568 153 aa13□□□□□ -0.33
CDH1-204ENST00000562118 PRKG2Q13237 762 aa13□□□□□ -0.33
CDH1-204ENST00000562118 PDAP1Q13442 181 aaKnown RBP13□□□□□ -0.33
CDH1-204ENST00000562118 KIR2DS3Q14952 304 aa13□□□□□ -0.33
CDH1-204ENST00000562118 PLCL1Q15111 1095 aa13□□□□□ -0.33
CDH1-204ENST00000562118 UAP1Q16222 522 aaPredicted RBP13□□□□□ -0.33
CDH1-204ENST00000562118 SBSNQ6UWP8 590 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CCDC91Q7Z6B0 441 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CLEC14AQ86T13 490 aa13□□□□□ -0.33
CDH1-204ENST00000562118 KMT5CQ86Y97 462 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CTAGE3PQ8IX95 158 aa13□□□□□ -0.33
CDH1-204ENST00000562118 CNPY4Q8N129 248 aa13□□□□□ -0.33
CDH1-204ENST00000562118 NKAPQ8N5F7 415 aaKnown RBP13□□□□□ -0.33
CDH1-204ENST00000562118 OR4E2Q8NGC2 313 aa13□□□□□ -0.33
CDH1-204ENST00000562118 WDR36Q8NI36 951 aaKnown RBP13□□□□□ -0.33
CDH1-204ENST00000562118 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ANKRD49Q8WVL7 239 aa13□□□□□ -0.33
CDH1-204ENST00000562118 JPH3Q8WXH2 748 aaPredicted RBP13□□□□□ -0.33
CDH1-204ENST00000562118 NCSTNQ92542 709 aa13□□□□□ -0.33
CDH1-204ENST00000562118 UBXN4Q92575 508 aa13□□□□□ -0.33
CDH1-204ENST00000562118 OR2A14Q96R47 310 aa13□□□□□ -0.33
CDH1-204ENST00000562118 PAFAH2Q99487 392 aa13□□□□□ -0.33
CDH1-204ENST00000562118 DERL2Q9GZP9 239 aa13□□□□□ -0.33
CDH1-204ENST00000562118 POLR1BQ9H9Y6 1135 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ASCL3Q9NQ33 180 aa13□□□□□ -0.33
CDH1-204ENST00000562118 HRASLS2Q9NWW9 162 aa13□□□□□ -0.33
CDH1-204ENST00000562118 EURLQ9NYK6 297 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ADAMTS6Q9UKP5 1117 aa13□□□□□ -0.33
CDH1-204ENST00000562118 IKZF3Q9UKT9 509 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ACSL6Q9UKU0 697 aa13□□□□□ -0.33
CDH1-204ENST00000562118 BTRCQ9Y297 605 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ACACBO00763 2458 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ANKRD12Q6UB98 2062 aa13□□□□□ -0.33
CDH1-204ENST00000562118 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
CDH1-204ENST00000562118 ENO2P09104 434 aaPredicted RBP12.99□□□□□ -0.33
CDH1-204ENST00000562118 SLC35E2BP0CK96 405 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 NELFEP18615 380 aaKnown RBP12.99□□□□□ -0.33
CDH1-204ENST00000562118 HSD17B2P37059 387 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 RAB10P61026 200 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 KRT33BQ14525 404 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 ZNF460Q14592 562 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 RASA2Q15283 850 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 SLC5A12Q1EHB4 618 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 ANKS6Q68DC2 871 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 SPESP1Q6UW49 350 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 OR9A1PQ8NGU1 263 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 CAVIN3Q969G5 261 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 LINGO1Q96FE5 620 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 TSPAN17Q96FV3 270 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 STRADBQ9C0K7 418 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 XKR8Q9H6D3 395 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 CAB39LQ9H9S4 337 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 SYTL2Q9HCH5 934 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 C1GALT1Q9NS00 363 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 SPHK1Q9NYA1 384 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 ACTR10Q9NZ32 417 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 TXNDC16Q9P2K2 825 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 SATB2Q9UPW6 733 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 PDE10AQ9Y233 779 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 PCDHGA3Q9Y5H0 932 aa12.99□□□□□ -0.33
CDH1-204ENST00000562118 IGHV5-51A0A0C4DH38 117 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 CCDC189A1A4V9 331 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PMS2P1A4D2B8 440 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 TRABD2BA6NFA1 517 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 C2orf74A8MZ97 194 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 PLD2O14939 933 aa12.98□□□□□ -0.33
CDH1-204ENST00000562118 KIF1CO43896 1103 aaKnown RBP12.98□□□□□ -0.33
CDH1-204ENST00000562118 ALDOAP04075 364 aaKnown RBP12.98□□□□□ -0.33
CDH1-204ENST00000562118 POLR2CP19387 275 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms