RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 NSUN5P2Q63ZY6 315 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TMEM198Q66K66 360 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 BRAT1Q6PJG6 821 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 FAM43BQ6ZT52 329 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 TMEM179Q6ZVK1 233 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 PM20D2Q8IYS1 436 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TRPV1Q8NER1 839 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 LPGAT1Q92604 370 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 RND1Q92730 232 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 PHF21BQ96EK2 531 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 RADILQ96JH8 1075 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 SPATA17Q96L03 361 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 C3orf30Q96M34 536 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 DGAT2Q96PD7 388 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 CMKLR1Q99788 373 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 MOV10L1Q9BXT6 1211 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 UPF3AQ9H1J1 476 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 KCNN2Q9H2S1 579 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 SLCO5A1Q9H2Y9 848 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 RPAP3Q9H6T3 665 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 ERVMER34-1Q9H9K5 563 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 NOX4Q9NPH5 578 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 CCDC177Q9NQR7 707 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 TRMT1Q9NXH9 659 aaKnown RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 WSB2Q9NYS7 404 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 SMARCAL1Q9NZC9 954 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 SIX4Q9UIU6 781 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 PADI1Q9ULC6 663 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 VDAC3Q9Y277 283 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 TMEM184BQ9Y519 407 aaPredicted RBP3.63□□□□□ -1.83
HERC1-215ENST00000561436 TRPV2Q9Y5S1 764 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 NUP98P52948 1817 aa3.63□□□□□ -1.83
HERC1-215ENST00000561436 HTTP42858 3142 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 IGLV5-37A0A075B6J1 123 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 LOC102723996A0A087X1L8 192 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 A0A1W2PR77 199 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 TRBC2A0A5B9 178 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 MAGEB17A8MXT2 336 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 FAM90A26D6RGX4 464 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 PROB1E7EW31 1015 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 PI4K2BG5E9Z4 385 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 SMAD6O43541 496 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 TSPAN1O60635 241 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 GGPS1O95749 300 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 FCGR1AP12314 374 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 DAOP14920 347 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 PRLRP16471 622 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 NR2F2P24468 414 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 USP8P40818 1118 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 SUOXP51687 545 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 GAGE2BQ13066 116 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 SNTB1Q13884 538 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 SNAPC1Q16533 368 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 KYNUQ16719 465 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 GAGE2EQ4V326 116 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 FAM98BQ52LJ0 330 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 TMEM35AQ53FP2 167 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 C18orf63Q68DL7 685 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 GAGE2AQ6NT46 116 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 TRNP1Q6NT89 227 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 ZNF704Q6ZNC4 412 aaPredicted RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 CLEC17AQ6ZS10 378 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 CHST3Q7LGC8 479 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 FOXRED2Q8IWF2 684 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 RNF113BQ8IZP6 322 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 SLC5A8Q8N695 610 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 GCSAMQ8N6F7 178 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 IQCF1Q8N6M8 205 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 ELP5Q8TE02 316 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 DUSP19Q8WTR2 217 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 PTPMT1Q8WUK0 201 aaPredicted RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 ZNF385AQ96PM9 386 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 CDRT15Q96T59 188 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 HGH1Q9BTY7 390 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 OR10A4Q9H209 315 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 KCNK15Q9H427 330 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 PFDN4Q9NQP4 134 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 ZNF224Q9NZL3 707 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 LARSQ9P2J5 1176 aaKnown RBP3.62□□□□□ -1.83
HERC1-215ENST00000561436 GAGE2DQ9UEU5 116 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 IL17BQ9UHF5 180 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 ANAPC2Q9UJX6 822 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 ZNF580Q9UK33 172 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 CCDC88AQ3V6T2 1871 aa3.62□□□□□ -1.83
HERC1-215ENST00000561436 LAMB2P55268 1798 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 IGLV5-52A0A0A0MRZ9 124 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ASB14A6NK59 587 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TSPY2A6NKD2 308 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ANKRD66B4E2M5 251 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 H7C0S8 307 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 UBE2CO00762 179 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 IKBKBO14920 756 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 ADAMDEC1O15204 470 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TBCAO75347 108 aaKnown RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 FLOT1O75955 427 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 KCNK5O95279 499 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TSPY3P0CV98 308 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 TSPY8P0CW00 308 aa3.61□□□□□ -1.83
HERC1-215ENST00000561436 POLR2CP19387 275 aaPredicted RBP3.61□□□□□ -1.83
HERC1-215ENST00000561436 KCNA5P22460 613 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms