RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	RILP	Q96NA2	401 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	CAMK1G	Q96NX5	476 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	NSUN5	Q96P11	429 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	CCM2	Q9BSQ5	444 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	NMUR2	Q9GZQ4	415 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	OR2AG1	Q9H205	316 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	ACTR5	Q9H9F9	607 aa	Predicted RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	PREB	Q9HCU5	417 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	TNFRSF12A	Q9NP84	129 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	POLM	Q9NP87	494 aa	Predicted RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	UTP6	Q9NYH9	597 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	DKK4	Q9UBT3	224 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	EIF2B4	Q9UI10	523 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	PCTP	Q9UKL6	214 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	FZD4	Q9ULV1	537 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	MMP17	Q9ULZ9	603 aa		7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	APOBEC2	Q9Y235	224 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	RRP15	Q9Y3B9	282 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	TNPO3	Q9Y5L0	923 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	COL5A1	P20908	1838 aa	Predicted RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	ZFC3H1	O60293	1989 aa	Known RBP	7.35	□□□□□ -1.23
TPM1-231	ENST00000561395	MGA	Q8IWI9	3026 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395		A0A087WV48	116 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SLC5A10	A0PJK1	596 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ANKRD65	E5RJM6	399 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	E2F3	O00716	465 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SLC16A5	O15375	505 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CCDC22	O60826	627 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	RNGTT	O60942	597 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CDK14	O94921	469 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SLCO2B1	O94956	709 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	MLYCD	O95822	493 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	JUN	P05412	331 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SERPINA6	P08185	405 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ENO2	P09104	434 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	GSTM1	P09488	218 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CD59	P13987	128 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ZNF8	P17098	575 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TSPAN8	P19075	237 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	NDUFV2	P19404	249 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CDH13	P55290	713 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CORO7	P57737	925 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	NCALD	P61601	193 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	RPS21	P63220	83 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SH3BP2	P78314	561 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CDKL1	Q00532	357 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	GSTM4	Q03013	218 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CLC	Q05315	142 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	GTF2H3	Q13889	308 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	FGL2	Q14314	439 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	KRT72	Q14CN4	511 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PDCD2	Q16342	344 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PHKG1	Q16816	387 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TUSC1	Q2TAM9	212 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SLC9B1	Q4ZJI4	515 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	FBXO48	Q5FWF7	155 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	CDKL4	Q5MAI5	379 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PEAR1	Q5VY43	1037 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	LYSMD4	Q5XG99	296 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SULT1C3	Q6IMI6	304 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	METTL2B	Q6P1Q9	378 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TMEM220	Q6QAJ8	160 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	USP30	Q70CQ3	517 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	UBE2R2	Q712K3	238 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	HEATR4	Q86WZ0	1026 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	HORMAD1	Q86X24	394 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TP53I13	Q8NBR0	393 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	OR2I1P	Q8NGU4	316 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	OR14C36	Q8NHC7	312 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TRPC4AP	Q8TEL6	797 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	AGAP11	Q8TF27	550 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ASZ1	Q8WWH4	475 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ASB11	Q8WXH4	323 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	MRGPRX1	Q96LB2	322 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	LINC00615	Q96LM1	132 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	LENG8	Q96PV6	779 aa	Predicted RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	C1QTNF2	Q9BXJ5	285 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SLC12A9	Q9BXP2	914 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TEX101	Q9BY14	249 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	NUF2	Q9BZD4	464 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	MEAF6	Q9HAF1	191 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PARVB	Q9HBI1	364 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TRIM39	Q9HCM9	518 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TCF7L2	Q9NQB0	619 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	SAR1A	Q9NR31	198 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TXLNG	Q9NUQ3	528 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ATXN10	Q9UBB4	475 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PTBP2	Q9UKA9	531 aa	Known RBP	7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	PILRB	Q9UKJ0	227 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	TRAF6	Q9Y4K3	522 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	ASB1	Q9Y576	335 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	DOCK9	Q9BZ29	2069 aa		7.34	□□□□□ -1.23
TPM1-231	ENST00000561395	NUMA1	Q14980	2115 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395		A0A1W2PQU0	124 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395	TCRBV21S2A2	A0A5A6	115 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395	TRPC5OS	A6NMA1	111 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395	CAPN14	A8MX76	684 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395	GFY	I3L273	518 aa		7.33	□□□□□ -1.24
TPM1-231	ENST00000561395	SDHD	O14521	159 aa		7.33	□□□□□ -1.24

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