RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 BTN3A1O00481 513 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PRICKLE3O43900 615 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 FKBP9O95302 570 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 GCAP28676 217 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CRABP2P29373 138 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PKLRP30613 574 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 LSSP48449 732 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC12A2P55011 1212 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 RAB10P61026 200 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 USP10Q14694 798 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 KIR2DS3Q14952 304 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 EFTUD2Q15029 972 aaKnown RBP eCLIP9.33□□□□□ -0.922e-13■■□□□ 12.6
RABGGTA-221ENST00000561055 RASA2Q15283 850 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CYP2A13Q16696 494 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 ANKS6Q68DC2 871 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 EMBQ6PCB8 327 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PIWIL4Q7Z3Z4 852 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 GSPT2Q8IYD1 628 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 MYO1HQ8N1T3 1032 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CFAP61Q8NHU2 1237 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 WDR36Q8NI36 951 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DENND1AQ8TEH3 1009 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 AENQ8WTP8 325 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DCAKDQ8WVC6 231 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DLG3Q92796 817 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC22A18Q96BI1 424 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 LINGO1Q96FE5 620 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PRR11Q96HE9 360 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CCDC74BQ96LY2 380 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PAFAH2Q99487 392 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 TMEM121BQ9BXQ6 578 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PARD6BQ9BYG5 372 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PITPNM3Q9BZ71 974 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DERL2Q9GZP9 239 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 CHRNA10Q9GZZ6 450 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 ZNF768Q9H5H4 540 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PPCSQ9HAB8 311 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PARVBQ9HBI1 364 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 GPAMQ9HCL2 828 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 C1GALT1Q9NS00 363 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 DKK4Q9UBT3 224 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 POMT2Q9UKY4 750 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC39A10Q9ULF5 831 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 RUVBL2Q9Y230 463 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 TDRKHQ9Y2W6 561 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 PCDHGA8Q9Y5G5 932 aa9.33□□□□□ -0.92
RABGGTA-221ENST00000561055 FER1L5A0AVI2 2057 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CCDC189A1A4V9 331 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 PIPSLA2A3N6 862 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 FAM149AA5PLN7 773 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 TLCD2A6NGC4 264 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 C2orf74A8MZ97 194 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 KRT38O76015 456 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CAPNS1P04632 268 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 INHBAP08476 426 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CHRM5P08912 532 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 ENO2P09104 434 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 MSL3P1P0C860 447 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC35E2BP0CK96 405 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 POLR2CP19387 275 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 PRDX3P30048 256 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 MAGEA12P43365 314 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 KPNA2P52292 529 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 PGGT1BP53609 377 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 GFERP55789 205 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 AP1S2P56377 157 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CDKL1Q00532 357 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 PRKAA1Q13131 559 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 C16orf72Q14CZ0 275 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 UAP1Q16222 522 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CCSMST1Q4G0I0 132 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SBSNQ6UWP8 590 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 UBE2R2Q712K3 238 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 RAB11FIP2Q7L804 512 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 LRRC56Q8IYG6 542 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 RAB42Q8N4Z0 105 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 MREGQ8N565 214 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 LINC01555Q8NAE3 123 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 AGBL5Q8NDL9 886 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 MCOLN3Q8TDD5 553 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SKA2Q8WVK7 121 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 ANKRD49Q8WVL7 239 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 JPH3Q8WXH2 748 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 GATA6Q92908 595 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SLC41A2Q96JW4 573 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 TGM7Q96PF1 710 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 OR2A14Q96R47 310 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 NRTNQ99748 197 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 CMKLR1Q99788 373 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 XKR8Q9H6D3 395 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 SYNDIG1Q9H7V2 258 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 POLR1BQ9H9Y6 1135 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 ACTR10Q9NZ32 417 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 LNPEPQ9UIQ6 1025 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 PDE10AQ9Y233 779 aa9.32□□□□□ -0.92
RABGGTA-221ENST00000561055 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms